RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 MEX3DQ86XN8 651 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 MCATQ8IVS2 390 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 OR5D16Q8NGK9 328 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ST8SIA2Q92186 375 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 GLYATL1Q969I3 302 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 HDAC10Q969S8 669 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 CREB3L1Q96BA8 519 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 NEDD4LQ96PU5 975 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 UGT2B28Q9BY64 529 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OR10A4Q9H209 315 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 DHX33Q9H6R0 707 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 COL14A1Q05707 1796 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 A0A1W2PPL8 197 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 MYL12BO14950 172 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SH3BGRLO75368 114 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 UGT2B17O75795 530 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ELAVL4P26378 380 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 DAOAP59103 153 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ENPEPQ07075 957 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 HYAL2Q12891 473 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OR8B8Q15620 311 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 C1orf94Q6P1W5 598 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 KLHDC10Q6PID8 442 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 AGTRAPQ6RW13 159 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ZNF836Q6ZNA1 936 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 TMCO2Q7Z6W1 182 aaPredicted RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 SERPINA9Q86WD7 417 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 CCDC36Q8IYA8 594 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 BANPQ8N9N5 519 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OR4K2Q8NGD2 314 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 MSI2Q96DH6 328 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 CIB1Q99828 191 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SUCNR1Q9BXA5 334 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 DPAGT1Q9H3H5 408 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 MINDY3Q9H8M7 445 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SLC40A1Q9NP59 571 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SLC35C2Q9NQQ7 365 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 GLRX2Q9NS18 164 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 GJB4Q9NTQ9 266 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OSER1Q9NX31 292 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 TAAR2Q9P1P5 351 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 RPL36Q9Y3U8 105 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 ICE1Q9Y2F5 2266 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 PRAMEF33A0A0G2JMD5 474 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 TRBV11-1A0A0K0K1C0 115 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 VILLO15195 856 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 EMC8O43402 210 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SLCO2B1O94956 709 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OAZ2O95190 189 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 GSTP1P09211 210 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 OR3A3P47888 321 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OR3A2P47893 321 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SRP9P49458 86 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 CDK6Q00534 326 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SCRN3Q0VDG4 424 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 TBC1D28Q2M2D7 210 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 GFOD2Q3B7J2 385 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 NKAIN1Q4KMZ8 207 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ABCA11PQ4W5N1 156 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 BEX5Q5H9J7 111 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ZNF766Q5HY98 468 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 MTX3Q5HYI7 312 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SLC26A9Q7LBE3 791 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 FBXW8Q8N3Y1 598 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 CISD2Q8N5K1 135 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 C11orf65Q8NCR3 313 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 LSM14AQ8ND56 463 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 THAP3Q8WTV1 239 aaPredicted RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 PPP1R13LQ8WUF5 828 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 OMA1Q96E52 524 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 FAM46AQ96IP4 442 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 ADGRG7Q96K78 797 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ALPK1Q96QP1 1244 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 PHB2Q99623 299 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ELOVL1Q9BW60 279 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 DSN1Q9H410 356 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ZBTB20Q9HC78 741 aaPredicted RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 POLR3BQ9NW08 1133 aaPredicted RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 SLCO1C1Q9NYB5 712 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SLC24A2Q9UI40 661 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 CDC42EP3Q9UKI2 254 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 PIGLQ9Y2B2 252 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 NOSIPQ9Y314 301 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 A0A1B0GX78 115 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 SMAD9O15198 467 aaKnown RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 PLIN3O60664 434 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 STK17BO94768 372 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 PROSCO94903 275 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 H6PDO95479 791 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 CLDN9O95484 217 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 TRBC1P01850 177 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ZNF883P0CG24 379 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 ATP1B2P14415 290 aaPredicted RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 MLLT6P55198 1093 aaPredicted RBP3.91□□□□□ -1.78
USH2A-202ENST00000366942 CDC42P60953 191 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 GUCY2DQ02846 1103 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 CHAF1BQ13112 559 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 DNAJC3Q13217 504 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 TMEM63BQ5T3F8 832 aa3.91□□□□□ -1.78
USH2A-202ENST00000366942 KDM4DQ6B0I6 523 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms