RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 HCFC1P51610 2035 aa15.41■□□□□ 0.06
MRPL55-217ENST00000366746 TAPBPO15533 448 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 RFPL3SP0C7P2 107 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ENDOUP21128 410 aaKnown RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 CPN2P22792 545 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 IVDP26440 423 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 HSPA7P48741 367 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 IRF8Q02556 426 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ILF2Q12905 390 aaKnown RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 FOXD4Q12950 439 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 TMEM35AQ53FP2 167 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 FBXO48Q5FWF7 155 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 SULT1C3Q6IMI6 304 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ZNF793Q6ZN11 406 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 CHSY3Q70JA7 882 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 UBE3DQ7Z6J8 389 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 CDC20BQ86Y33 519 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ANKMY2Q8IV38 441 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ULK2Q8IYT8 1036 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 SPATA6LQ8N4H0 392 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 NEIL3Q8TAT5 605 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 PAQR8Q8TEZ7 354 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 FAM222BQ8WU58 562 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ESAMQ96AP7 390 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 SPACA9Q96E40 222 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 WDR34Q96EX3 536 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 JSRP1Q96MG2 331 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ALPK1Q96QP1 1244 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 WDR83Q9BRX9 315 aaKnown RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 TMEM79Q9BSE2 394 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 ACKR4Q9NPB9 350 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 QPCTLQ9NXS2 382 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 NSMCE4AQ9NXX6 385 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 CNIH4Q9P003 139 aa15.4■□□□□ 0.06
MRPL55-217ENST00000366746 PRRC2AP48634 2157 aaKnown RBP15.4■□□□□ 0.06
MRPL55-217ENST00000366746 A6NNC1 897 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 RTCAO00442 366 aaKnown RBP15.39■□□□□ 0.05
MRPL55-217ENST00000366746 PRAMEF4O60810 478 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 FOSL1P15407 271 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 BMP5P22003 454 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 HIST1H1TP22492 207 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-217ENST00000366746 MSH2P43246 934 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 STT3AP46977 705 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 CHIT1Q13231 466 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 BIKQ13323 160 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 FLYWCH1Q4VC44 716 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 CDKL4Q5MAI5 379 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 PRAMEF20Q5VT98 475 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 PRAMEF9Q5VWM5 478 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 FBXW10Q5XX13 1052 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 CAMKMTQ7Z624 323 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 OR4N5Q8IXE1 308 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 C9orf40Q8IXQ3 194 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 DND1Q8IYX4 353 aaKnown RBP15.39■□□□□ 0.05
MRPL55-217ENST00000366746 MMP21Q8N119 569 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 LRRC25Q8N386 305 aaPredicted RBP15.39■□□□□ 0.05
MRPL55-217ENST00000366746 FAM13CQ8NE31 585 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 PPWD1Q96BP3 646 aaKnown RBP15.39■□□□□ 0.05
MRPL55-217ENST00000366746 ART5Q96L15 291 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 SLC6A15Q9H2J7 730 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 RHOJQ9H4E5 214 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 SH2D2AQ9NP31 389 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 MOCS1Q9NZB8 636 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 CD274Q9NZQ7 290 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 ZNF407Q9C0G0 2248 aa15.39■□□□□ 0.05
MRPL55-217ENST00000366746 IQANK1A0A1B0GTG1 560 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 AHRRA9YTQ3 701 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 CES2O00748 559 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 FGF17O60258 216 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 CCNT2O60583 730 aaKnown RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 IGKV3-11P04433 115 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 CCDC166P0CW27 439 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 DRD2P14416 443 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 CD22P20273 847 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 SERPINB3P29508 390 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 SSR2P43308 183 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 TRPC1P48995 793 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 ASCL1P50553 236 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 PLIN5Q00G26 463 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 POU4F1Q01851 419 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 SLAMF1Q13291 335 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 TBCCQ15814 346 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 ADGRD1Q6QNK2 874 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 SYDE1Q6ZW31 735 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 FBXO36Q8NEA4 188 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 ZNF473Q8WTR7 871 aaKnown RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 RNASE6Q93091 150 aaKnown RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 UBE2E3Q969T4 207 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 TSPAN17Q96FV3 270 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 MS4A8Q9BY19 250 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 GSX1Q9H4S2 264 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 RYDENQ9NUL5 291 aaKnown RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 MS4A12Q9NXJ0 267 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 MTRF1LQ9UGC7 380 aaKnown RBP15.38■□□□□ 0.05
MRPL55-217ENST00000366746 SNX12Q9UMY4 172 aa15.38■□□□□ 0.05
MRPL55-217ENST00000366746 C15orf38-AP3S2A0A0A6YYH1 394 aa15.37■□□□□ 0.05
MRPL55-217ENST00000366746 SH3BGRLO75368 114 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms