RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ENDOVQ8N8Q3 282 aaKnown RBP10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 TTLQ8NG68 377 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC37A2Q8TED4 501 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 LCN9Q8WX39 176 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 JADE3Q92613 823 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 VPS33AQ96AX1 596 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC22A18Q96BI1 424 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 SNRNP40Q96DI7 357 aaKnown RBP10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 NRTNQ99748 197 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 SARGQ9BW04 601 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 ING2Q9H160 280 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 DCLRE1BQ9H816 532 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 RNPEPL1Q9HAU8 725 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 CD300AQ9UGN4 299 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 BCAP29Q9UHQ4 241 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
CSNK1E-202ENST00000366216 TRBC2A0A5B9 178 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ANKDD1BA6NHY2 528 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 C21orf140B9A014 251 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 H7BY64 318 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 FKBP6O75344 327 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 SEMA3DO95025 777 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 FKBP9O95302 570 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 VIPP01282 170 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 PGRP06401 933 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 CHRM5P08912 532 aaPredicted RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 TACR1P25103 407 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 CMPK1P30085 196 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 PEBP1P30086 187 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 TIA1P31483 386 aaKnown RBP eCLIP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ITGA1P56199 1179 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 YBX1P67809 324 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 RAE1P78406 368 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 MEF2AQ02078 507 aaPredicted RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 SRSF11Q05519 484 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 PWP1Q13610 501 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 KIR2DS3Q14952 304 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 RBBP5Q15291 538 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 FAM174BQ3ZCQ3 159 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 TIGD2Q4W5G0 525 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 AAGABQ6PD74 315 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 VN1R5Q7Z5H4 357 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 TRIM48Q8IWZ4 208 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ADGRF3Q8IZF5 1079 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 KRTCAP2Q8N6L1 136 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 C1orf52Q8N6N3 182 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ZNF740Q8NDX6 193 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 OR2L3Q8NG85 312 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 CT55Q8WUE5 264 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC13A3Q8WWT9 602 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 STMN2Q93045 179 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 PRAP1Q96NZ9 151 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 TSSK3Q96PN8 268 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 MS4A8Q9BY19 250 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 SRMSQ9H3Y6 488 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 MRPS30Q9NP92 439 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ASF1BQ9NVP2 202 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 AHSPQ9NZD4 102 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 ADA2Q9NZK5 511 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 CPNE7Q9UBL6 633 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 SUCOQ9UBS9 1254 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 PADI1Q9ULC6 663 aa10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 WBP11Q9Y2W2 641 aaKnown RBP10.63□□□□□ -0.71
CSNK1E-202ENST00000366216 MN1Q10571 1320 aaPredicted RBP10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 IGKV1-8A0A0C4DH67 115 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 PCDH7O60245 1069 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 CLEC3AO75596 197 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 CEACAM4O75871 244 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 TIAF1O95411 115 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 PSMG1O95456 288 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 TGFB1P01137 390 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 ANKRD34CP0C6C1 535 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 HSD17B1P14061 328 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC6A2P23975 617 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 S100A3P33764 101 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 GRK3P35626 688 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 AHRP35869 848 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC7A2P52569 658 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 DGKQP52824 942 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 GFERP55789 205 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 HHEXQ03014 270 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 TRAP1Q12931 704 aaKnown RBP10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 IL11RAQ14626 422 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SF1Q15637 639 aaKnown RBP10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 MAPKAPK3Q16644 382 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SPANXN4Q5MJ08 99 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 DEPDC1Q5TB30 811 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 ZNF425Q6IV72 752 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC2A7Q6PXP3 512 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 DLEU7Q6UYE1 221 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 CAMKMTQ7Z624 323 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 DHDDSQ86SQ9 333 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC9B2Q86UD5 537 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 PACS2Q86VP3 889 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC15A3Q8IY34 581 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 TBC1D19Q8N5T2 526 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 ANKRD53Q8N9V6 530 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms