RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
LDB3-202ENST00000361373 KRTCAP2Q8N6L1 136 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 OR52P1PQ8NH57 321 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 POLDIP3Q9BY77 421 aaKnown RBP12.89□□□□□ -0.35
LDB3-202ENST00000361373 RNF38Q9H0F5 515 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 ZBP1Q9H171 429 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 HS3ST2Q9Y278 367 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 PCDHGB6Q9Y5F9 930 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 ECHS1P30084 290 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 HSF2Q03933 536 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 CBLBQ13191 982 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 ANKRD33Q7Z3H0 272 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 ZBTB46Q86UZ6 589 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 OR52N2Q8NGI0 321 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 C1orf216Q8TAB5 229 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 NAT6Q93015 286 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 SH3YL1Q96HL8 342 aaPredicted RBP12.89□□□□□ -0.35
LDB3-202ENST00000361373 NARS2Q96I59 477 aaKnown RBP12.89□□□□□ -0.35
LDB3-202ENST00000361373 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 TMEM9Q9P0T7 183 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 FTSJ1Q9UET6 329 aa12.89□□□□□ -0.35
LDB3-202ENST00000361373 POLR1CO15160 346 aaPredicted RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 RNF13O43567 381 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 ZNF542PQ5EBM4 170 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 PNCKQ6P2M8 343 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 ARL9Q6T311 187 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 AKAP14Q86UN6 197 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 MARCH9Q86YJ5 346 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 OR2L2Q8NH16 312 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 A0A0X1KG70 313 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 GPR37L1O60883 481 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 GALK1P51570 392 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 AFF1P51825 1210 aaKnown RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 OR12D2P58182 307 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 ACTC1P68032 377 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 ACTA1P68133 377 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 SH3BP2P78314 561 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 SLC15A3Q8IY34 581 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 PSD4Q8NDX1 1056 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 CCDC54Q8NEL0 328 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 OR2T33Q8NG76 320 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 C16orf78Q8WTQ4 265 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 KCNN1Q92952 543 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 HLA-CQ95604 372 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 DPPA5A6NC42 116 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 GRXCR1A8MXD5 290 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 H0YJX3 145 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 TPD52L2O43399 206 aaKnown RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 HTR1AP08908 422 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 PEPDP12955 493 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 YPEL5P62699 121 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 CDK3Q00526 305 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 TYSND1Q2T9J0 566 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 CNTN4Q8IWV2 1026 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 OR8K5Q8NH50 307 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 EZH1Q92800 747 aaPredicted RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 RBCK1Q9BYM8 510 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 HCN2Q9UL51 889 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 A0A0J9YY10 115 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 A0A1B0GVI7 797 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 PRAMEF2O60811 474 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 CSTBP04080 98 aaKnown RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 GJA4P35212 333 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 ZNF84P51523 738 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 CLCN2P51788 898 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 MRPL49Q13405 166 aaKnown RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 LYSMD4Q5XG99 296 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 HSD11B1LQ7Z5J1 315 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 SATL1Q86VE3 508 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 UBE2J2Q8N2K1 259 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 MED28Q9H204 178 aa12.88□□□□□ -0.35
LDB3-202ENST00000361373 MTHFD2LQ9H903 347 aaPredicted RBP12.88□□□□□ -0.35
LDB3-202ENST00000361373 EME2A4GXA9 379 aaPredicted RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 E7EQ34 232 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ADAM12O43184 909 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 DNAJB5O75953 348 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ZNF12P17014 697 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ERVPABLB-1P60509 514 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 CDKL1Q00532 357 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 MGAT3Q09327 533 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 GINS1Q14691 196 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ALG1LQ6GMV1 187 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms