RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SLC35F1Q5T1Q4 408 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 KDM4DQ6B0I6 523 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 RAB12Q6IQ22 244 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HIST3H2AQ7L7L0 130 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 NUDT13Q86X67 352 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 COMMD2Q86X83 199 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 DNAJC5GQ8N7S2 189 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 NUDT8Q8WV74 236 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HIST1H2ACQ93077 130 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 NT5C3BQ969T7 300 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 TREM1Q9NP99 234 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC35C2Q9NQQ7 365 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 RBFOX1Q9NWB1 397 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 MAST2Q6P0Q8 1798 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 A0A075B6Q4 140 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HOXC11O43248 304 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HPGDSO60760 199 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 UQCRC2P22695 453 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 CFL1P23528 166 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 GABRR2P28476 465 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 SSTR2P30874 369 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 PCGF2P35227 344 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HMGCLP35914 325 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 RPL35P42766 123 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 RPS26P62854 115 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 ZMYND11Q15326 602 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 ZNF791Q3KP31 576 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 FAM122CQ6P4D5 195 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 FUT10Q6P4F1 479 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 FAM198BQ6UWH4 519 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 CREB3L2Q70SY1 520 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 PM20D2Q8IYS1 436 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 PCNPQ8WW12 178 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 FERD3LQ96RJ6 166 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 PAAF1Q9BRP4 392 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 NT5DC2Q9H857 520 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 QPCTLQ9NXS2 382 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 MUSKO15146 869 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 HSD3B1P14060 373 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 HSD3B2P26439 372 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 HK3P52790 923 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 SP3Q02447 781 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 FLYWCH1Q4VC44 716 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 RIMKLAQ8IXN7 391 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 PDZD9Q8IXQ8 264 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 OR6K6Q8NGW6 343 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 CCDC107Q8WV48 283 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 NEDD4LQ96PU5 975 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ASB4Q9Y574 426 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 DISC1C4P0D8 188 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 GNB5O14775 395 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ARHGEF15O94989 841 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ACADMP11310 421 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 JUNDP17535 347 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ADAM8P78325 824 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 BTN1A1Q13410 526 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 TRAM2Q15035 370 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 SFRP4Q6FHJ7 346 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 TMEM17Q86X19 198 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 PROKR2Q8NFJ6 384 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 DPF3Q92784 378 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 KCNN1Q92952 543 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 YIPF6Q96EC8 236 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ELMOD3Q96FG2 381 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 CSF3RQ99062 836 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 TSNAXQ99598 290 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 GPR52Q9Y2T5 361 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 MROH6A6NGR9 719 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 NFKBIEO00221 500 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ACRV1P26436 265 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 APEX1P27695 318 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 GKP32189 559 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 RRAS2P62070 204 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 SEMA3BQ13214 749 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 FNDC3BQ53EP0 1204 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 OR4K5Q8NGD3 323 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ARRDC2Q8TBH0 407 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 CXorf40AQ8TE69 158 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 CHFRQ96EP1 664 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 MCCC1Q96RQ3 725 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 STOX2Q9P2F5 926 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 SLCO3A1Q9UIG8 710 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 KLHL21Q9UJP4 597 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ALS2Q96Q42 1657 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ITGA10O75578 1167 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 NUDT14O95848 222 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 TMIGD1Q6UXZ0 262 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ARL14EPQ8N8R7 260 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 ADAMTS19Q8TE59 1207 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 TSEN15Q8WW01 171 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 RIT1Q92963 219 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 IMP3Q9NV31 184 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 UTS2RQ9UKP6 389 aa15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-201ENST00000361311 DOT1LQ8TEK3 1739 aa15.27■□□□□ 0.04
CLSTN1-201ENST00000361311 A0A0U1RQS6 177 aa15.27■□□□□ 0.04
CLSTN1-201ENST00000361311 PTPN2P17706 415 aa15.27■□□□□ 0.04
CLSTN1-201ENST00000361311 TAS2R43P59537 309 aa15.27■□□□□ 0.04
CLSTN1-201ENST00000361311 PAQR9Q6ZVX9 377 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms