RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ANKRD13BQ86YJ7 626 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CLHC1Q8NHS4 586 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 STARD8Q92502 1023 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 EBPLQ9BY08 206 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 FBXO4Q9UKT5 387 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 SH3GLB1Q9Y371 365 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 NAALAD2Q9Y3Q0 740 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 BCKDKO14874 412 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 PIAS2O75928 621 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ANXA4P09525 319 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CTSKP43235 329 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 GZMMP51124 257 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CYP4F2P78329 520 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 IL5RAQ01344 420 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF846Q147U1 533 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 SHBQ15464 509 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 RGS21Q2M5E4 152 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CTU2Q2VPK5 515 aaKnown RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 GTDC1Q4AE62 458 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 KIAA1614Q5VZ46 1190 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CEP68Q76N32 757 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 OOSP2Q86WS3 158 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ZDHHC21Q8IVQ6 265 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 HS3ST5Q8IZT8 346 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC15A4Q8N697 577 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CHPT1Q8WUD6 406 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF347Q96SE7 839 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 CCDC90BQ9GZT6 254 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 HRASLS2Q9NWW9 162 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 SCN3BQ9NY72 215 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ACTR10Q9NZ32 417 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 ENPP5Q9UJA9 477 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
SQSTM1-201ENST00000360718 M0QX08 132 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 RFXANKO14593 260 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PPM1DO15297 605 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PCDH7O60245 1069 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 LCMT2O60294 686 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PRMT3O60678 531 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 BCAS1O75363 584 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CLEC3AO75596 197 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 SEMA3DO95025 777 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 SERPIND1P05546 499 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 UGT2B7P16662 529 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PRPS1L1P21108 318 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PRKACGP22612 351 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 IGFBP5P24593 272 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 TIA1P31483 386 aaKnown RBP eCLIP12.49□□□□□ -0.417e-7■■□□□ 12.5
SQSTM1-201ENST00000360718 FASLGP48023 281 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 TRPC1P48995 793 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ARRB1P49407 418 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PPP1CAP62136 330 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CDK5R2Q13319 367 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 KHDRBS2Q5VWX1 349 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PIK3C3Q8NEB9 887 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CDC26Q8NHZ8 85 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 OR2A14Q96R47 310 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CSF3RQ99062 836 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 MS4A8Q9BY19 250 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 DGCR6LQ9BY27 220 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 GABARAPL1Q9H0R8 117 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 SIRT5Q9NXA8 310 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ERGIC3Q9Y282 383 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 SAP18O00422 153 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 HTR1AP08908 422 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 TFPTP0C1Z6 253 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 GIMD1P0DJR0 217 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 AGXTP21549 392 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 TACR1P25103 407 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 AHRP35869 848 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 MAGEA2P43356 314 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CXCR4P61073 352 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 KEAP1Q14145 624 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 DPY19L1Q2PZI1 675 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 DEPDC1Q5TB30 811 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CPZQ66K79 652 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF425Q6IV72 752 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ERICH5Q6P6B1 374 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PAGE2Q7Z2X7 111 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 COMMD6Q7Z4G1 85 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF438Q7Z4V0 828 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 TMEM179BQ7Z7N9 219 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 SERPINA11Q86U17 422 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 CENPSQ8N2Z9 138 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 METTL4Q8N3J2 472 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ARL14Q8N4G2 192 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PIGKQ92643 395 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 RORBQ92753 470 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 C11orf24Q96F05 449 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 APOL4Q9BPW4 351 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 HMG20AQ9NP66 347 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms