RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TNFAIP8L2Q6P589 184 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM64Q6YI46 380 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 OR4C15Q8NGM1 316 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 SFXN5Q8TD22 340 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 SLC38A5Q8WUX1 472 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 ZFPM2Q8WW38 1151 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 RASSF5Q8WWW0 418 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 SLC35G5Q96KT7 338 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 GUCD1Q96NT3 240 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 AMDHD1Q96NU7 426 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 PIP5K1AQ99755 562 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 CD93Q9NPY3 652 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 SEMA3GQ9NS98 782 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 TPRKBQ9Y3C4 175 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 MTCH2Q9Y6C9 303 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 COL6A3P12111 3177 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 A6NCN8 305 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 E9PQ18 207 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 NOL3O60936 208 aaKnown RBP17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 SEMA4FO95754 770 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 EML2O95834 649 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 ANGPTL1O95841 491 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 IFNW1P05000 195 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 BCHEP06276 602 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 TFPTP0C1Z6 253 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 RHCEP18577 417 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 XCR1P46094 333 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 RGS1Q08116 209 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 TP53BP2Q13625 1128 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 TJAP1Q5JTD0 557 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 TPRG1LQ5T0D9 272 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 LAIR2Q6ISS4 152 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 BHLHB9Q6PI77 547 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 SPARTQ8N0X7 666 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 OR10G2Q8NGC3 310 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 OR8K5Q8NH50 307 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 MOAP1Q96BY2 351 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM19Q96HH6 336 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 ZNF607Q96SK3 696 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 DOK1Q99704 481 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 PSD2Q9BQI7 771 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM168Q9H0V1 697 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 GLIPR2Q9H4G4 154 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 FANCEQ9HB96 536 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 SCN3BQ9NY72 215 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 POFUT2Q9Y2G5 429 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 NAALAD2Q9Y3Q0 740 aa17.33■□□□□ 0.37
PDLIM7-203ENST00000359895 PPM1DO15297 605 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 PRAMEF10O60809 474 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CYP4B1P13584 511 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 JUNDP17535 347 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 TNFRSF1BP20333 461 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 AGXTP21549 392 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 SLC19A1P41440 591 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 RABIFP47224 123 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 OR1E2P47887 323 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CCR5P51681 352 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 NCBP2P52298 156 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■□□□□ 8.3
PDLIM7-203ENST00000359895 HMGA2P52926 109 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CCINQ13939 588 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 MICAQ29983 383 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ALG11Q2TAA5 492 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 OR13F1Q8NGS4 319 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 NT5CQ8TCD5 201 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 JPH3Q8WXH2 748 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 FAM3CQ92520 227 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 GAL3ST3Q96A11 431 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 NODALQ96S42 347 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CDX2Q99626 313 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ROGDIQ9GZN7 287 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 TWSG1Q9GZX9 223 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 GIMAP4Q9NUV9 329 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ANKMY1Q9P2S6 941 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 P2RX2Q9UBL9 471 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ENOPH1Q9UHY7 261 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ENTPD4Q9Y227 616 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 A0A1W2PR48 441 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 C10orf142B7Z368 130 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 PRAMEF26H0Y7S4 382 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 BTN3A3O00478 584 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 HMGN4O00479 90 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 MRPS14O60783 128 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 SEC14L2O76054 403 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ASGR2P07307 311 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 PXNP49023 591 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 KHKP50053 298 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CDH12P55289 794 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 RPS26P62854 115 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CSNK2BP67870 215 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ILF3Q12906 894 aaKnown RBP eCLIP17.32■□□□□ 0.363e-6■■□□□ 11.7
PDLIM7-203ENST00000359895 PRRT3Q5FWE3 981 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 BPIFB6Q8NFQ5 453 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 CCL4L1Q8NHW4 92 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 HMGB4Q8WW32 186 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 PROX1Q92786 737 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 C12orf43Q96C57 262 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 HRASLS5Q96KN8 279 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 POLMQ9NP87 494 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 TIMMDC1Q9NPL8 285 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms