RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 CARD8Q9Y2G2 431 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 CEPT1Q9Y6K0 416 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 CLCA1A8K7I4 914 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 ANHXE9PGG2 379 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 PYCR1P32322 319 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 SOX2P48431 317 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 NRIP1P48552 1158 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 PROX2Q3B8N5 592 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 MRPL10Q7Z7H8 261 aaKnown RBP13.14□□□□□ -0.31
VCP-201ENST00000358901 JAGN1Q8N5M9 183 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 OR2T33Q8NG76 320 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 OR7G3Q8NG95 312 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 PHOSPHO1Q8TCT1 267 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 PROKR1Q8TCW9 393 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 TMEM19Q96HH6 336 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 CST11Q9H112 138 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 CDH10Q9Y6N8 788 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 ENPP4Q9Y6X5 453 aa13.14□□□□□ -0.31
VCP-201ENST00000358901 RHOP08100 348 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SDC1P18827 310 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 HK3P52790 923 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 FAM214AQ32MH5 1076 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 LSMEM2Q8N112 164 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 LNX2Q8N448 690 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 OR4K5Q8NGD3 323 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 OR9Q2Q8NGE9 314 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 OR52N2Q8NGI0 321 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 ARRDC2Q8TBH0 407 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 EGLN2Q96KS0 407 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 DPYSL5Q9BPU6 564 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SPATA9Q9BWV2 254 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SLC6A15Q9H2J7 730 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 DCAF13Q9NV06 445 aaKnown RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 L7N2F9 121 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 WRBO00258 174 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 GSRP00390 522 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 TYRP1P17643 537 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 S100GP29377 79 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SLC6A6P31641 620 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CTSOP43234 321 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 RNF144AP50876 292 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 DEFB134Q4QY38 66 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 NXPE4Q6UWF7 544 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 TMEM25Q86YD3 366 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 C7orf61Q8IZ16 206 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SHKBP1Q8TBC3 707 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 DOK4Q8TEW6 326 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 PAQR5Q9NXK6 330 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 POLR2CP19387 275 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 RGRP47804 291 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SCGB2B2Q4G0G5 96 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 PRAMEF17Q5VTA0 474 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 LRIG1Q96JA1 1093 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 ABCG5Q9H222 651 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CXCL16Q9H2A7 254 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 TMEM5Q9Y2B1 443 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 NPIPB15A6NHN6 443 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 COQ9O75208 318 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CBLP22681 906 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CCKBRP32239 447 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 MAGEA3P43357 314 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 ZNF81P51508 661 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SMU1Q2TAY7 513 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 MAVSQ7Z434 540 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 TIGD4Q8IY51 512 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 ZNF527Q8NB42 609 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 PSD4Q8NDX1 1056 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 NUP43Q8NFH3 380 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 OR8K3Q8NH51 312 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 SMPDL3BQ92485 455 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 DPH7Q9BTV6 452 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
VCP-201ENST00000358901 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
VCP-201ENST00000358901 TLX3O43711 291 aaPredicted RBP13.12□□□□□ -0.31
VCP-201ENST00000358901 VAMP1P23763 118 aa13.12□□□□□ -0.31
VCP-201ENST00000358901 TAS2R43P59537 309 aa13.12□□□□□ -0.31
VCP-201ENST00000358901 RELAQ04206 551 aa13.12□□□□□ -0.31
VCP-201ENST00000358901 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.12□□□□□ -0.31
VCP-201ENST00000358901 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
VCP-201ENST00000358901 OR2L3Q8NG85 312 aa13.12□□□□□ -0.31
VCP-201ENST00000358901 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
VCP-201ENST00000358901 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms