RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 PUM1Q14671 1186 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 GANABQ14697 944 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 SUZ12Q15022 739 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 SF1Q15637 639 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 CYP27C1Q4G0S4 372 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 ZNF385BQ569K4 471 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 CBARPQ8N350 705 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 FAM26EQ8N5C1 309 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 OR4A15Q8NGL6 344 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 TM9SF4Q92544 642 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 SENP5Q96HI0 755 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 ATF6BQ99941 703 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 FUZQ9BT04 418 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 BHLHE41Q9C0J9 482 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 NT5DC2Q9H857 520 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 BRF2Q9HAW0 419 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 RC3H2Q9HBD1 1191 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 ZFYVE1Q9HBF4 777 aa11.54□□□□□ -0.56
SMARCAL1-201ENST00000357276 FAM227AF5H4B4 570 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 SCO1O75880 301 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 ETHE1O95571 254 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 IGFBP1P08833 259 aaPredicted RBP11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 SLC6A1P30531 599 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 FEN1P39748 380 aaKnown RBP11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 RPS25P62851 125 aaKnown RBP11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 CHRNA6Q15825 494 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 USP30Q70CQ3 517 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 SYT14Q8NB59 555 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 OR8H1Q8NGG4 311 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 OMA1Q96E52 524 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 AIFM2Q9BRQ8 373 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 PRR14Q9BWN1 585 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 YARS2Q9Y2Z4 477 aaKnown RBP11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 GLYATL1P3A0A0U1RQE8 302 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 H0YIV9 168 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 FABP7O15540 132 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 SEMA7AO75326 666 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 RAF1P04049 648 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 TNNI3P19429 210 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 NSG1P42857 185 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 CDK6Q00534 326 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 B4GALNT1Q00973 533 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 BEX3Q00994 111 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 SEC23BQ15437 767 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 ZNF630Q2M218 657 aaPredicted RBP11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 KLHL22Q53GT1 634 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 C3orf38Q5JPI3 329 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 PXDC1Q5TGL8 231 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 ANKRD54Q6NXT1 300 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 HJURPQ8NCD3 748 aaPredicted RBP11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 ZNF485Q8NCK3 441 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 LHFPL5Q8TAF8 219 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 UCN3Q969E3 161 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 SORCS2Q96PQ0 1159 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 FOLH1BQ9HBA9 442 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 POLHQ9Y253 713 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 DNAH12Q6ZR08 3092 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 FRMPD3Q5JV73 1810 aa11.53□□□□□ -0.56
SMARCAL1-201ENST00000357276 LOC102723532A0A0G2JNH3 316 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 TMEM129A0AVI4 362 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 C7orf66A4D0T2 115 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 INMT-MINDY4F8WBC2 141 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 SLC16A5O15375 505 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 RAB36O95755 333 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ARAFP10398 606 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ZNF250P15622 560 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 LHCGRP22888 699 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ACSM2AQ08AH3 577 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 SP140Q13342 867 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 MPPE1Q53F39 396 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 PLA1AQ53H76 456 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ACSM2BQ68CK6 577 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 GPR139Q6DWJ6 353 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 LINGO4Q6UY18 593 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 HDDC2Q7Z4H3 204 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 GPR65Q8IYL9 337 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 OXR1Q8N573 874 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ZNF366Q8N895 744 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ATAD1Q8NBU5 361 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 SLC37A3Q8NCC5 494 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 P2RY13Q9BPV8 354 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 RSPO3Q9BXY4 272 aaPredicted RBP11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 LIN7BQ9HAP6 207 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 SLC28A3Q9HAS3 691 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 PTTG3PQ9NZH4 202 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 MGAT4BQ9UQ53 548 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 ASB4Q9Y574 426 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.56
SMARCAL1-201ENST00000357276 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.57
SMARCAL1-201ENST00000357276 TRBC2A0A5B9 178 aa11.52□□□□□ -0.57
SMARCAL1-201ENST00000357276 PRR23AA6NEV1 266 aa11.52□□□□□ -0.57
SMARCAL1-201ENST00000357276 HPGDSO60760 199 aa11.52□□□□□ -0.57
SMARCAL1-201ENST00000357276 IFNA14P01570 189 aa11.52□□□□□ -0.57
SMARCAL1-201ENST00000357276 MPC1LP0DKB6 136 aa11.52□□□□□ -0.57
SMARCAL1-201ENST00000357276 POU1F1P28069 291 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms