RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 RFX3P48380 749 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PRPS1P60891 318 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 DECR1Q16698 335 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SLC39A12Q504Y0 691 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ADGRF1Q5T601 910 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM198Q66K66 360 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CMTM3Q96MX0 182 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CCL15-CCL14A0A0B4J2E2 113 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PCDH17O14917 1159 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SPATA31D3P0C874 917 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RANP62826 216 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CCL15Q16663 113 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 C3orf33Q6P1S2 294 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 NPNTQ6UXI9 565 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SPATA31D4Q6ZUB0 917 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CYP4X1Q8N118 509 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RAD9AQ99638 391 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 OR2AG1Q9H205 316 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 J3QRK9 145 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 LRATO95237 230 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RPP30P78346 268 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CAP1Q01518 475 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HNRNPA0Q13151 305 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TATDN3Q17R31 274 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ALG10BQ5I7T1 473 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM31Q5JXX7 168 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 OTUD1Q5VV17 481 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CD163Q86VB7 1156 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 UMODL1-AS1Q8N2C9 162 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SCGB1C1Q8TD33 95 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 MUL1Q969V5 352 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 FBXL8Q96CD0 374 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 C12orf42Q96LP6 360 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ADARB2Q9NS39 739 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 BTBD17A6NE02 478 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TBPP20226 339 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 DLSTP36957 453 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SMAD3P84022 425 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CBFBQ13951 182 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 DHRS4L2Q6PKH6 230 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 OR7G3Q8NG95 312 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 OR6K6Q8NGW6 343 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF563Q8TA94 476 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 QTRT2Q9H974 415 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SCPEP1Q9HB40 452 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SERINC1Q9NRX5 453 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ZCCHC3Q9NUD5 404 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 INTS6Q9UL03 887 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ABHD14A-ACY1A0A1B0GW23 586 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ARRDC5A6NEK1 342 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 CRHBPP24387 322 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HOXC12P31275 282 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 KCNJ5P48544 419 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 AMHR2Q16671 573 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD54Q6NXT1 300 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 C5orf46Q6UWT4 87 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 PTRH1Q86Y79 214 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SFXN5Q8TD22 340 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 GAL3ST3Q96A11 431 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 HDCP19113 662 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 LILRA4P59901 499 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ENPP2Q13822 863 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SERPINA9Q86WD7 417 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 DUS3LQ96G46 650 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 NPY6RQ99463 290 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD19PQ9H560 264 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SMCO4Q9NRQ5 59 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 MRPL17Q9NRX2 175 aaKnown RBP6.32□□□□□ -1.4
VPS13B-202ENST00000357162 UFSP2Q9NUQ7 469 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 TVP23BQ9NYZ1 205 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 ABRACLQ9P1F3 81 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 RNF150Q9ULK6 438 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
VPS13B-202ENST00000357162 LRRC72A6NJI9 287 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 FAM155AB1AL88 458 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 STK25O00506 426 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ALX3O95076 343 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 NFATC1O95644 943 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MAP1SQ66K74 1059 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PDZD3Q86UT5 571 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TREML1Q86YW5 311 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 OR52J3Q8NH60 311 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TAAR8Q969N4 342 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PDZD7Q9H5P4 517 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 C9IYK1 514 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SSX2Q16385 188 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TSTQ16762 297 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 AMZ2Q86W34 360 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 HORMAD2Q8N7B1 307 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RPL3LQ92901 407 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 AHCYL2Q96HN2 611 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM248Q9NWD8 314 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RBM7Q9Y580 266 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 GALP22466 123 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms