RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ARHGEF15O94989 841 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 CBSLP0DN79 551 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 IFNA8P32881 189 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 EVI2BP34910 448 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 CBSP35520 551 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 AVPR1BP47901 424 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 RAB8AP61006 207 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 IL18Q14116 193 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 GPR19Q15760 415 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 ANXA8L1Q5VT79 327 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 SIGIRRQ6IA17 410 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 LHFPL3Q86UP9 236 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 DBF4BQ8NFT6 615 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 OR52N2Q8NGI0 321 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 HCAR2Q8TDS4 363 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 CLP1Q92989 425 aaKnown RBP9.65□□□□□ -0.86
PTPRA-203ENST00000356147 SLC25A46Q96AG3 418 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 COQ7Q99807 217 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 WACQ9BTA9 647 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 FAM83DQ9H4H8 585 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 REEP4Q9H6H4 257 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 SLA2Q9H6Q3 261 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 CWH43Q9H720 699 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 TBC1D17Q9HA65 648 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 SLC25A19Q9HC21 320 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 B3GAT2Q9NPZ5 323 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 CNOT2Q9NZN8 540 aaKnown RBP9.65□□□□□ -0.86
PTPRA-203ENST00000356147 REV1Q9UBZ9 1251 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 PCDHB7Q9Y5E2 793 aa9.65□□□□□ -0.86
PTPRA-203ENST00000356147 FAM240BA0A1B0GVZ2 78 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 WASHC1A8K0Z3 465 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 FAM25AB3EWG3 89 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 FAM25CB3EWG5 89 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 FAM25GB3EWG6 89 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 M0R3H8 397 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 OR2B3O76000 313 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 SLC2A2P11168 524 aaPredicted RBP9.65□□□□□ -0.87
PTPRA-203ENST00000356147 CYP2A6P11509 494 aaPredicted RBP9.65□□□□□ -0.87
PTPRA-203ENST00000356147 POU3F3P20264 500 aaPredicted RBP9.65□□□□□ -0.87
PTPRA-203ENST00000356147 ETV3P41162 512 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 OR3A3P47888 321 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 MAP4K2Q12851 820 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 SLBPQ14493 270 aaKnown RBP eCLIP9.65□□□□□ -0.87
PTPRA-203ENST00000356147 TRIM71Q2Q1W2 868 aaKnown RBP9.65□□□□□ -0.87
PTPRA-203ENST00000356147 SYTL3Q4VX76 610 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 LYPLAL1Q5VWZ2 237 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 LIPJQ5W064 366 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 TRIQKQ629K1 86 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF770Q6IQ21 691 aaPredicted RBP9.65□□□□□ -0.87
PTPRA-203ENST00000356147 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 CNIH2Q6PI25 160 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 WASH2PQ6VEQ5 465 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 TPRG1Q6ZUI0 275 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 TECPR1Q7Z6L1 1165 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 AMIGO1Q86WK6 493 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 CMTM8Q8IZV2 173 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 Q8N402 240 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 DCAF4L2Q8NA75 395 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 TET1Q8NFU7 2136 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 GPR32P1Q8NGA4 272 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 CHTF18Q8WVB6 975 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 UPRTQ96BW1 309 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 REPS1Q96D71 796 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 LRR1Q96L50 414 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 FCRL1Q96LA6 429 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 KATNB1Q9BVA0 655 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 TMED9Q9BVK6 235 aa9.65□□□□□ -0.87
PTPRA-203ENST00000356147 C2orf92A0A1B0GVN3 265 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 A0A1W2PRB8 838 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 GSAPA4D1B5 854 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 CASKO14936 926 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 POLR1CO15160 346 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-203ENST00000356147 ADAMTS4O75173 837 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 NME6O75414 186 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-203ENST00000356147 EOMESO95936 686 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 IGSF6O95976 241 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 CH25HO95992 272 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 IL3P08700 152 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 IMPA1P29218 277 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 GSTM5P46439 218 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 ASMTP46597 345 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 LIMS1P48059 325 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 CTBP2P56545 445 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 RHAGQ02094 409 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 HSPB3Q12988 150 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 ASAH1Q13510 395 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 HEPACAMQ14CZ8 416 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 DCST1Q5T197 706 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 DDI2Q5TDH0 399 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 ACSM5Q6NUN0 579 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 TCTN3Q6NUS6 607 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 TRIM40Q6P9F5 258 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 UNC5DQ6UXZ4 953 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 Q6ZVU0 165 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 COMTD1Q86VU5 262 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 RDH10Q8IZV5 341 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 HORMAD2Q8N7B1 307 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 NANOGP1Q8N7R0 232 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 C19orf18Q8NEA5 215 aa9.64□□□□□ -0.87
PTPRA-203ENST00000356147 OR2AP1Q8NGE2 309 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms