RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 POU6F2P78424 691 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 SLC18A2Q05940 514 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 RAB31Q13636 194 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 SLC10A1Q14973 349 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 FAM214AQ32MH5 1076 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 C6orf141Q5SZD1 244 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 AWAT2Q6E213 333 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 TPPP3Q9BW30 176 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 DCSTAMPQ9H295 470 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 F5H5K5 113 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 RPS17P08708 135 aaKnown RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 TPSB2P20231 275 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 RPS21P63220 83 aaKnown RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 TPSAB1Q15661 275 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 BCL2L15Q5TBC7 163 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 TMPRSS7Q7RTY8 843 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 SMIM15Q7Z3B0 74 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 AK4P27144 223 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 NDUFA6P56556 154 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 CDK6Q00534 326 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF681Q96N22 645 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 CNOT11Q9UKZ1 510 aaKnown RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 TCRBV5S4A2TA0A5A2 114 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 CD8B2A6NJW9 211 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 H7C2Y5 167 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 CD8BP10966 210 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 SERINC3Q13530 473 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 RLIMQ9NVW2 624 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 OAZ3Q9UMX2 235 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 PRELID1Q9Y255 219 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 ARID1AO14497 2285 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 H3BML4 177 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 M0QX08 132 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 GCH1P30793 250 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 CCNHP51946 323 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 EIF2B1Q14232 305 aaKnown RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 FIGNL1Q6PIW4 674 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 BBS10Q8TAM1 723 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 TLR6Q9Y2C9 796 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF705FA8MVS1 300 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 UPK3BL1B0FP48 263 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 UPK3BL2E5RIL1 263 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF705DP0CH99 300 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF705BP0CI00 300 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 L1CAMP32004 1257 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 SAMD12Q8N8I0 201 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 WDSUB1Q8N9V3 476 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 OR7G1Q8NGA0 311 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 CHPT1Q8WUD6 406 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 OR5B2Q96R09 309 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 LMF1Q96S06 567 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 MS4A12Q9NXJ0 267 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 TUBA8Q9NY65 449 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-201ENST00000356083 CAMK2AQ9UQM7 478 aa16.58■□□□□ 0.25
COL27A1-201ENST00000356083 TRBV2A0A0J9YWF9 115 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 ECM1Q16610 540 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM201Q5SNT2 666 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 ESX1Q8N693 406 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 OR56A1Q8NGH5 318 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 GINS3Q9BRX5 216 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 ST6GALNAC5Q9BVH7 336 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 TPSD1Q9BZJ3 242 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 ABCA6Q8N139 1617 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 SLC34A2O95436 690 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 SOX3P41225 446 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM107Q6UX40 140 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 SLC5A11Q8WWX8 675 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 IRGQQ8WZA9 623 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM209Q96SK2 561 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 VEGFDO43915 354 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 ARL6IP5O75915 188 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 H6PDO95479 791 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 HLA-DQB2P05538 268 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 MMP8P22894 467 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 RGS6P49758 472 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 ADGRF1Q5T601 910 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 BRAT1Q6PJG6 821 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 OR9A1PQ8NGU1 263 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 NAALAD2Q9Y3Q0 740 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 HSPB11Q9Y547 144 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 KNG1P01042 644 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 FKBP1BP68106 108 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 TIGD5Q53EQ6 642 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 HORMAD2Q8N7B1 307 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 C15orf40Q8WUR7 153 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 TSPAN18Q96SJ8 248 aa16.58■□□□□ 0.24
COL27A1-201ENST00000356083 LRCH4O75427 683 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 CKMT1AP12532 417 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 PTPN6P29350 595 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 GLT8D1Q68CQ7 371 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 GTF2H4Q92759 462 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 SUCNR1Q9BXA5 334 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 LRRN3Q9H3W5 708 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 ZBTB26Q9HCK0 441 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 UBIAD1Q9Y5Z9 338 aa16.57■□□□□ 0.24
COL27A1-201ENST00000356083 RBBP9O75884 186 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms