RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RNF4P78317 190 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 CMPK2Q5EBM0 449 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 TCHHL1Q5QJ38 904 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 LETMD1Q6P1Q0 360 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 KLC3Q6P597 504 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 LYPD8Q6UX82 237 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 IL20RBQ6UXL0 311 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 C3P1Q6ZMU1 363 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 Q6ZPB1 254 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 GPR180Q86V85 440 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 MMP21Q8N119 569 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 MORN4Q8NDC4 146 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 SRFBP1Q8NEF9 429 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 OR4F6Q8NGB9 312 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 OR52N2Q8NGI0 321 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 ZNF483Q8TF39 744 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 MZB1Q8WU39 189 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 PHF12Q96QT6 1004 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 ROGDIQ9GZN7 287 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 RPF2Q9H7B2 306 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 DDX31Q9H8H2 851 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 PRM3Q9NNZ6 103 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 CLCA3PQ9Y6N3 262 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 CRYBG3Q68DQ2 2970 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 STX16-NPEPL1H3BU86 382 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 STX16O14662 325 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 ADAM10O14672 748 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 PGRMC2O15173 223 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 HS6ST1O60243 411 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 UGDHO60701 494 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 CLDN9O95484 217 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 RBP1P09455 135 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 PRF1P14222 555 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 ZNF24P17028 368 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 SERPINB1P30740 379 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 HPDP32754 393 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 STT3AP46977 705 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 ADGRD1Q6QNK2 874 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 HSDL2Q6YN16 418 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 SPPL2CQ8IUH8 684 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 TMEM156Q8N614 296 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 PSD4Q8NDX1 1056 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 OR14A16Q8NHC5 309 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 HBEGFQ99075 208 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 NTMT1Q9BV86 223 aa15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 MRPL1Q9BYD6 325 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 YARS2Q9Y2Z4 477 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 PHF3Q92576 2039 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-201ENST00000355572 EXOC1LA0A1B0GW35 172 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 GOLGA8RI6L899 631 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 KRT38O76015 456 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 ABHD2P08910 425 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 CT62P0C5K7 136 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 FAM58BPP0C7Q3 252 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 TNNI3P19429 210 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 SOX18P35713 384 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 CCNG1P51959 295 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 CUL3Q13618 768 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 SERTAD2Q14140 314 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 UNC50Q53HI1 259 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 SGO1Q5FBB7 561 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 HORMAD2Q8N7B1 307 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 C16orf52Q8NHV5 167 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 DAZLQ92904 295 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 SENP5Q96HI0 755 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 CCDC77Q9BR77 488 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 ADGRE2Q9UHX3 823 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 TNPO3Q9Y5L0 923 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 LIPGQ9Y5X9 500 aa15.49■□□□□ 0.07
PDLIM7-201ENST00000355572 HCFC1P51610 2035 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 A0A1B0GTH9 108 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 FOXE1O00358 373 aaPredicted RBP15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 DLX3O60479 287 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 OR4F21O95013 312 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 SNRPAP09012 282 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 CCL3P10147 92 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 COL6A2P12110 1019 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 CHN1P15882 459 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 PTX3P26022 381 aaPredicted RBP15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 PER3P56645 1201 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 HERVK_113P63132 956 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 ERVK-8P63133 956 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 DUSP2Q05923 314 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 ASPHQ12797 758 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 RCN2Q14257 317 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 SLC29A2Q14542 456 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 TSNAXIP1Q2TAA8 658 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 FRG2Q64ET8 278 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 TIFABQ6ZNK6 161 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 CEP128Q6ZU80 1094 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 MRGPRGQ86SM5 289 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 DOLPP1Q86YN1 238 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 RPRMLQ8N4K4 120 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 ZFP62Q8NB50 900 aaPredicted RBP15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 TMEM125Q96AQ2 219 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 DGAT2Q96PD7 388 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 TMEM237Q96Q45 408 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 FRG2BQ96QU4 278 aa15.48■□□□□ 0.07
PDLIM7-201ENST00000355572 MRPL57Q9BQC6 102 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms