RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 HSD3B2P26439 372 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 ATG9BQ674R7 924 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 SLC7A11Q9UPY5 501 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 OR6C70A6NIJ9 312 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 LATS1O95835 1130 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 GLDCP23378 1020 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 MINDY2Q8NBR6 621 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 OR8J3Q8NGG0 315 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 THAP4Q8WY91 577 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 MSLNLQ96KJ4 702 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 SCP2D1Q9UJQ7 156 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 PGCP20142 388 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 SLC27A4Q6P1M0 643 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 NXPE4Q6UWF7 544 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 CASTOR1Q8WTX7 329 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 TEPSINQ96N21 525 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 FAAHO00519 579 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 E2F3O00716 465 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 GPR143P51810 404 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 FXYD6P3P58550 94 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 GRIK2Q13002 908 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 FADDQ13158 208 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 DOC2AQ14183 400 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 GRK1Q15835 563 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 CES4AQ5XG92 561 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 OR52E8Q6IFG1 317 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 PLXDC1Q8IUK5 500 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 PSD4Q8NDX1 1056 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 OR5L2Q8NGL0 311 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 MROQ9BYG7 248 aa17.28■□□□□ 0.36
COL18A1-202ENST00000355480 SDC3O75056 442 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 E2F1Q01094 437 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 CD83Q01151 205 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 ALDH16A1Q8IZ83 802 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 OR52P1PQ8NH57 321 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 FOXJ1Q92949 421 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 ZUFSPQ96AP4 578 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 OR10A4Q9H209 315 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 ZBTB20Q9HC78 741 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-202ENST00000355480 PPM1BO75688 479 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 SEMA4FO95754 770 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 LHCGRP22888 699 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 GRB7Q14451 532 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■■■□□ 14.8
COL18A1-202ENST00000355480 TRIM43Q96BQ3 446 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-202ENST00000355480 EHD1Q9H4M9 534 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 ENAMQ9NRM1 1142 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 SYPP08247 313 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 ZNF35P13682 527 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 HHEXQ03014 270 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 ZC3H14Q6PJT7 736 aaKnown RBP17.27■□□□□ 0.36
COL18A1-202ENST00000355480 PIP5K1AQ99755 562 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 DOHHQ9BU89 302 aa17.27■□□□□ 0.36
COL18A1-202ENST00000355480 RFPL1O75677 317 aa17.27■□□□□ 0.35
COL18A1-202ENST00000355480 RAD51DO75771 328 aa17.27■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.35
COL18A1-202ENST00000355480 NAA10P41227 235 aaPredicted RBP17.27■□□□□ 0.35
COL18A1-202ENST00000355480 GBX1Q14549 363 aa17.27■□□□□ 0.35
COL18A1-202ENST00000355480 OR4C11Q6IEV9 310 aa17.27■□□□□ 0.35
COL18A1-202ENST00000355480 SLC17A9Q9BYT1 436 aa17.27■□□□□ 0.35
COL18A1-202ENST00000355480 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
COL18A1-202ENST00000355480 EPHA6Q9UF33 1036 aa17.27■□□□□ 0.35
COL18A1-202ENST00000355480 PORP16435 677 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 OR56A3Q8NH54 315 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 NAA11Q9BSU3 229 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 STOX2Q9P2F5 926 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 SH3PXD2BA1X283 911 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 A6NLC8 198 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 H3BSA7 217 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 OTX2P32243 289 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ST3GAL4Q11206 333 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 COL9A2Q14055 689 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ABRAXAS2Q15018 415 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ZER1Q7Z7L7 766 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 KCNS2Q9ULS6 477 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 A0A1B0GVC2 190 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 SOCS2O14508 198 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF217O75362 1048 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 CD70P32970 193 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ADH7P40394 386 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ZDHHC1Q8WTX9 485 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 MARCH4Q9P2E8 410 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 SUOXP51687 545 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ARSFP54793 590 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 EXOC3L2Q2M3D2 409 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 VMACQ2NL98 169 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 OR4N5Q8IXE1 308 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 SLC37A3Q8NCC5 494 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 PEX11GQ96HA9 241 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF317Q96PQ6 595 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 SRA1Q9HD15 236 aaKnown RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 RTCAO00442 366 aaKnown RBP17.26■□□□□ 0.35
COL18A1-202ENST00000355480 SEC14L5O43304 696 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 THEGLP0DJG4 465 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 CDKN2DP55273 166 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 DEFA5Q01523 94 aa17.26■□□□□ 0.35
COL18A1-202ENST00000355480 TMEM35AQ53FP2 167 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms