RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SIRPB2Q5JXA9 342 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ATF7IP2Q5U623 682 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PRAMEF20Q5VT98 475 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 OTUD1Q5VV17 481 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FAM159AQ6UWV7 190 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PRSS48Q7RTY5 328 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 GPR141Q7Z602 305 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 EXOC3L1Q86VI1 746 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLC22A16Q86VW1 577 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CENPLQ8N0S6 344 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CERS5Q8N5B7 392 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FADS6Q8N9I5 356 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CCDC197Q8NCU1 140 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 STKLD1Q8NE28 680 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FAM110BQ8TC76 370 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ATP8B4Q8TF62 1192 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLC47A1Q96FL8 570 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ZFYVE19Q96K21 471 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 C4orf45Q96LM5 186 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 C10orf90Q96M02 699 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 C17orf77Q96MU5 243 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 UBAC1Q9BSL1 405 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 C1QTNF7Q9BXJ2 289 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 THAP2Q9H0W7 228 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 RIBC2Q9H4K1 309 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 RIOX1Q9H6W3 641 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 VPS37BQ9H9H4 285 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 C3orf14Q9HBI5 128 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLC25A19Q9HC21 320 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CRLF2Q9HC73 371 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 GDAP2Q9NXN4 497 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ATXN10Q9UBB4 475 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MRTO4Q9UKD2 239 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FAF1Q9UNN5 650 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 DLGAP4Q9Y2H0 992 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MYH14Q7Z406 1995 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TRBV5-5A0A0J9YX44 114 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 LOC101059948A0A1B0GTJ6 334 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FAM149AA5PLN7 773 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ARHGEF35A5YM69 484 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 LGALS8O00214 317 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 EEF2KO00418 725 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PALMO75781 387 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 BAG4O95429 457 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ZBTB11O95625 1053 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TXNDC12O95881 172 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 UQCRFS1P1P0C7P4 283 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PLA2G2AP14555 144 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FCGR2BP31994 310 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SFTPDP35247 375 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ID1P41134 155 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 RPP38P78345 283 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NAAAQ02083 359 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLC3A1Q07837 685 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CHI3L2Q15782 390 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MAPK6Q16659 721 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ANKRD55Q3KP44 614 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 KRTAP15-1Q3LI76 137 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 HSP90AB3PQ58FF7 597 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM41BQ5BJD5 291 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 C10orf120Q5SQS8 335 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 KCNIP4Q6PIL6 250 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ARSKQ6UWY0 536 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 COX8CQ7Z4L0 72 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 LHFPL4Q7Z7J7 247 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM123Q8N131 208 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 RYBPQ8N488 228 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TCEANCQ8N8B7 351 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NOA1Q8NC60 698 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PHLDA1Q8WV24 401 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CCDC107Q8WV48 283 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SUSD6Q92537 303 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ANP32BQ92688 251 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 P3H4Q92791 437 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ULK4Q96C45 1275 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 AGAP3Q96P47 875 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CCNL2Q96S94 520 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CBWD1Q9BRT8 395 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MMTAG2Q9BU76 263 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NUSAP1Q9BXS6 441 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLC26A1Q9H2B4 701 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 STK26Q9P289 416 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 B9D1Q9UPM9 204 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SATB2Q9UPW6 733 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 INSL6Q9Y581 213 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 HS3ST3B1Q9Y662 390 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 VCANP13611 3396 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 AFDNP55196 1824 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PIEZO1Q92508 2521 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TRAPPC8Q9Y2L5 1435 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 HNRNPCL2B2RXH8 293 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 TEX46H3BTG2 121 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 M0R296 226 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 PDXKO00764 312 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 CLDN3O15551 220 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 MED7O43513 233 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 CTSVO60911 334 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 KCNJ13O60928 360 aa1.46□□□□□ -2.17
BRCA1-202ENST00000354071 SNNO75324 88 aaPredicted RBP1.46□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms