RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 KCNC4Q03721 635 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TPRG1LQ5T0D9 272 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 BPIFB6Q8NFQ5 453 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SLC38A5Q8WUX1 472 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 UCN3Q969E3 161 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 C12orf43Q96C57 262 aaKnown RBP15.82■□□□□ 0.12
SAMM50-201ENST00000350028 AMDHD1Q96NU7 426 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 BBS4Q96RK4 519 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 PIP5K1AQ99755 562 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 GABARAPL3Q9BY60 117 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SRMSQ9H3Y6 488 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 GLIPR2Q9H4G4 154 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 CD93Q9NPY3 652 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TRNAU1APQ9NX07 287 aaKnown RBP15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TPRKBQ9Y3C4 175 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 NAALAD2Q9Y3Q0 740 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TMEM247A6NEH6 219 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 B4GALT2O60909 372 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SEC14L2O76054 403 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 RASGRP1O95267 797 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 BCHEP06276 602 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 JUNDP17535 347 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 RHCEP18577 417 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 GPC1P35052 558 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SLC19A1P41440 591 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 HMGA2P52926 109 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SRP54P61011 504 aaKnown RBP15.82■□□□□ 0.12
SAMM50-201ENST00000350028 RPS15AP62244 130 aaKnown RBP15.82■□□□□ 0.12
SAMM50-201ENST00000350028 RPP38P78345 283 aaKnown RBP15.82■□□□□ 0.12
SAMM50-201ENST00000350028 KIR2DS3Q14952 304 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 MICAQ29983 383 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 GPR107Q5VW38 600 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TMEM64Q6YI46 380 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 OR10G2Q8NGC3 310 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 OR8K5Q8NH50 307 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 JPH3Q8WXH2 748 aaPredicted RBP15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TMEM19Q96HH6 336 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SLC35G5Q96KT7 338 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 NODALQ96S42 347 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 TMEM168Q9H0V1 697 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 KCNK12Q9HB15 430 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SCN3BQ9NY72 215 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 SNX11Q9Y5W9 270 aa15.82■□□□□ 0.12
SAMM50-201ENST00000350028 COL6A3P12111 3177 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 A0A1W2PR48 441 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 A6NCN8 305 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 C2CD4DB7Z1M9 353 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 C4orf51C9J302 202 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 HMGN4O00479 90 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 ZW10O43264 779 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 IFNW1P05000 195 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 F3P13726 295 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 ANXA11P50995 505 aaKnown RBP15.81■□□□□ 0.12
SAMM50-201ENST00000350028 CDH12P55289 794 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 RPS26P62854 115 aaKnown RBP15.81■□□□□ 0.12
SAMM50-201ENST00000350028 TP53BP2Q13625 1128 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 TJAP1Q5JTD0 557 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 XAF1Q6GPH4 301 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 Q7L0L9 218 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 SMYD1Q8NB12 490 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 CCL4L1Q8NHW4 92 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 CNIH3Q8TBE1 160 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 SFXN5Q8TD22 340 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 RASSF5Q8WWW0 418 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 MSANTD3Q96H12 275 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 ZNF607Q96SK3 696 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 FEVQ99581 238 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 MACROD1Q9BQ69 325 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 PSD2Q9BQI7 771 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 TWSG1Q9GZX9 223 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 SEMA3GQ9NS98 782 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 LYARQ9NX58 379 aaKnown RBP15.81■□□□□ 0.12
SAMM50-201ENST00000350028 APOBEC3BQ9UH17 382 aaKnown RBP15.81■□□□□ 0.12
SAMM50-201ENST00000350028 EBF1Q9UH73 591 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 CDC14AQ9UNH5 594 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 POFUT2Q9Y2G5 429 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 SH3GLB1Q9Y371 365 aa15.81■□□□□ 0.12
SAMM50-201ENST00000350028 BTN3A3O00478 584 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 MRPS14O60783 128 aaKnown RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 NOL3O60936 208 aaKnown RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 MFN2O95140 757 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 SEMA4FO95754 770 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 STATHP02808 62 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 HOXB3P14651 431 aaPredicted RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 CD247P20963 164 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 PXNP49023 591 aaPredicted RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 NCBP2P52298 156 aaKnown RBP eCLIP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 CSNK2BP67870 215 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 MAD2L1BPQ15013 274 aaPredicted RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 EXOC3L2Q2M3D2 409 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ALG11Q2TAA5 492 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 PRRT3Q5FWE3 981 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ZNF605Q86T29 641 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 SLC5A8Q8N695 610 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 NT5CQ8TCD5 201 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ZFPM2Q8WW38 1151 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 RAB8BQ92930 207 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 MOAP1Q96BY2 351 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 HRASLS5Q96KN8 279 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 TIMMDC1Q9NPL8 285 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms