RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 MEOX1P50221 254 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 MMP16P51512 607 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 BIKQ13323 160 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 DDX39BQ13838 428 aaKnown RBP11.06□□□□□ -0.64
TUBD1-203ENST00000346141 RNFT1Q5M7Z0 435 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 XKRXQ6PP77 449 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 TAOK1Q7L7X3 1001 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 RETREG3Q86VR2 466 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 SULF2Q8IWU5 870 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 IFT20Q8IY31 132 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 EID3Q8N140 333 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 ZCCHC7Q8N3Z6 543 aaKnown RBP11.06□□□□□ -0.64
TUBD1-203ENST00000346141 ZFP62Q8NB50 900 aaPredicted RBP11.06□□□□□ -0.64
TUBD1-203ENST00000346141 OR5L2Q8NGL0 311 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 AENQ8WTP8 325 aaKnown RBP11.06□□□□□ -0.64
TUBD1-203ENST00000346141 GPR78Q96P69 363 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 FMO2Q99518 471 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 OR8D2Q9GZM6 311 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 VPS11Q9H270 941 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 DMRT3Q9NQL9 472 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 HPF1Q9NWY4 346 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 COPS7AQ9UBW8 275 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 PHF11Q9UIL8 331 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 ERVK-11Q9UQG0 969 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 IKBKGQ9Y6K9 419 aa11.06□□□□□ -0.64
TUBD1-203ENST00000346141 TMEM200CA6NKL6 621 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SAP18O00422 153 aaKnown RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 DYRK3O43781 588 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 PRKNO60260 465 aaPredicted RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 ACSL3O95573 720 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 RBP1P09455 135 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 PTX3P26022 381 aaPredicted RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 TLX1P31314 330 aaPredicted RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SERPINB9P50453 376 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SMSP52788 366 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 IGLV3-21P80748 117 aaPredicted RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SLAMF1Q13291 335 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 GTF2H2Q13888 395 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 TECRLQ5HYJ1 363 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 GTF2H2CQ6P1K8 395 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 EMBQ6PCB8 327 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 MDGA2Q7Z553 956 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 GOLGA7Q7Z5G4 137 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 TICAM1Q8IUC6 712 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 L3MBTL4Q8NA19 623 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 C16orf52Q8NHV5 167 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SLC2A12Q8TD20 617 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 SLC44A1Q8WWI5 657 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 ASB15Q8WXK1 588 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 TANKQ92844 425 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 ISL2Q96A47 359 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 ANKRD9Q96BM1 317 aaPredicted RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 MTERF1Q99551 399 aaKnown RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 CDC42EP4Q9H3Q1 356 aaKnown RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 RUBCNLQ9H714 662 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 IPPKQ9H8X2 491 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 CPSF2Q9P2I0 782 aaKnown RBP11.05□□□□□ -0.64
TUBD1-203ENST00000346141 TMCO1Q9UM00 188 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 MEMO1Q9Y316 297 aa11.05□□□□□ -0.64
TUBD1-203ENST00000346141 APCP25054 2843 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 MYOCOSA0A1B0GUC4 107 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 PLPP1O14494 284 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 PRRG2O14669 202 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 FGF17O60258 216 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 KRT38O76015 456 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 CNTFP26441 200 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 BUD31P41223 144 aaPredicted RBP11.04□□□□□ -0.64
TUBD1-203ENST00000346141 MAGEA12P43365 314 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 STT3AP46977 705 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 HK2P52789 917 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 RNF4P78317 190 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 HSF1Q00613 529 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 PLIN5Q00G26 463 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 TNFRSF17Q02223 184 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 ID2Q02363 134 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 CUL3Q13618 768 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 CASP8Q14790 479 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 CPSF6Q16630 551 aaKnown RBP eCLIP11.04□□□□□ -0.64
TUBD1-203ENST00000346141 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 GPR180Q86V85 440 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 CHERPQ8IWX8 916 aaKnown RBP11.04□□□□□ -0.64
TUBD1-203ENST00000346141 CAVIN3Q969G5 261 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 RBM18Q96H35 190 aaKnown RBP11.04□□□□□ -0.64
TUBD1-203ENST00000346141 DGAT2Q96PD7 388 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 RASL10BQ96S79 203 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 PAFAH2Q99487 392 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
TUBD1-203ENST00000346141 LYARQ9NX58 379 aaKnown RBP11.04□□□□□ -0.64
TUBD1-203ENST00000346141 PPT2Q9UMR5 302 aa11.04□□□□□ -0.64
TUBD1-203ENST00000346141 ARHGAP10A1A4S6 786 aa11.03□□□□□ -0.64
TUBD1-203ENST00000346141 LRRC14BA6NHZ5 514 aa11.03□□□□□ -0.64
TUBD1-203ENST00000346141 E9PLN8 166 aa11.03□□□□□ -0.64
TUBD1-203ENST00000346141 STX16-NPEPL1H3BU86 382 aa11.03□□□□□ -0.64
TUBD1-203ENST00000346141 WWP2O00308 870 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms