RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 HRH2P25021 359 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 HOXD12P35452 270 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 DNTTIP1Q9H147 329 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 ATG4BQ9Y4P1 393 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 P2RX6O15547 441 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 ASPAP45381 313 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 RRAS2P62070 204 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-201ENST00000345617 ADAMTS19Q8TE59 1207 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 A8MV72 311 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-201ENST00000345617 SLC1A7O00341 560 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 DLX3O60479 287 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 DPEP1P16444 411 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 PAQR3Q6TCH7 311 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 CMASQ8NFW8 434 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-201ENST00000345617 LRRN4Q8WUT4 740 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 MEGF11A6BM72 1044 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 OR8U9P0C7N5 309 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 CAMK2DQ13557 499 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 CMTM1Q8IZ96 169 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 SYT14Q8NB59 555 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 C2CD4AQ8NCU7 369 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-201ENST00000345617 OR7D4Q8NG98 312 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 OR2AG1Q9H205 316 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 FAM118AQ9NWS6 357 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 MYO7AQ13402 2215 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 KIAA1217Q5T5P2 1943 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 GMPRP36959 345 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 EIF2DP41214 584 aaKnown RBP18.63■□□□□ 0.57
HDAC4-201ENST00000345617 GPR143P51810 404 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 ECM1Q16610 540 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 NT5DC2Q9H857 520 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 POLE4Q9NR33 117 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 UNC119BA6NIH7 251 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 RAB4AP20338 218 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 DUSP28Q4G0W2 176 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 UNC5DQ6UXZ4 953 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 SMPDL3AQ92484 453 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 MGLLQ99685 303 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 ADAP2Q9NPF8 381 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 SMIM28A0A1B0GU29 152 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 FUOMA2VDF0 154 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 G6PDP11413 515 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 UFM1P61960 85 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 MOGSQ13724 837 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 BCL2L15Q5TBC7 163 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 SEZ6LQ9BYH1 1024 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 CD244Q9BZW8 370 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 RGPD1P0DJD0 1748 aa18.63■□□□□ 0.57
HDAC4-201ENST00000345617 KLK1P06870 262 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 CD48P09326 243 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 DCST2Q5T1A1 773 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 C22orf42Q6IC83 251 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 TGM7Q96PF1 710 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 SEC61A2Q9H9S3 476 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ANKRD31Q8N7Z5 1873 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 BCL9LQ86UU0 1499 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 TRBV2A0A0J9YWF9 115 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ERI3O43414 337 aaKnown RBP18.62■□□□□ 0.57
HDAC4-201ENST00000345617 CCINQ13939 588 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF440Q8IYI8 595 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 OR14C36Q8NHC7 312 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 THAP4Q8WY91 577 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 PRRT1Q99946 306 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 DUS2Q9NX74 493 aaKnown RBP18.62■□□□□ 0.57
HDAC4-201ENST00000345617 KLRF1Q9NZS2 232 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 CYP8B1Q9UNU6 501 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 FBXO7Q9Y3I1 522 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ATP1B2P14415 290 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-201ENST00000345617 TLDC1Q6P9B6 456 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 NAPRTQ6XQN6 538 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 GOLGA7Q7Z5G4 137 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 GNRHRP30968 328 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 MLLT3P42568 568 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-201ENST00000345617 GHRHRQ02643 423 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 WDR26Q9H7D7 661 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 AHSA1O95433 338 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ADRB3P13945 408 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 RBMS1P29558 406 aaKnown RBP18.62■□□□□ 0.57
HDAC4-201ENST00000345617 CD97P48960 835 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 IFNL1Q8IU54 200 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 PARPBPQ9NWS1 579 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 AKAP11Q9UKA4 1901 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 BLOC1S5-TXNDC5H3BN57 136 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 GDF10P55107 478 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 GPX6P59796 221 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 LRRTM4Q86VH4 590 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 KCNJ16Q9NPI9 418 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 PCTPQ9UKL6 214 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 KCNS2Q9ULS6 477 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 SCN2AQ99250 2005 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 HLA-DQB2P05538 268 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 HK3P52790 923 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ACTR1AP61163 376 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 MELKQ14680 651 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 SGCBQ16585 318 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 DCAF12L1Q5VU92 463 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 GPR139Q6DWJ6 353 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 DCUN1D3Q8IWE4 304 aa18.62■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF578Q96N58 590 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-201ENST00000345617 PHRF1Q9P1Y6 1649 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms