RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OCRLQ01968 901 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ZNF763Q0D2J5 394 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 PDCD2Q16342 344 aaPredicted RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 EXT1Q16394 746 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 SMU1Q2TAY7 513 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 GALNTL6Q49A17 601 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ATP1A1-AS1Q5TC04 95 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 NDUFAF5Q5TEU4 345 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 Q6ZSR9 355 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 IKBIPQ70UQ0 350 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ANKRD37Q7Z713 158 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 WDR75Q8IWA0 830 aaKnown RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 SCUBE1Q8IWY4 988 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 FAM9CQ8IZT9 166 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 TMEM132CQ8N3T6 1108 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 OR4K14Q8NGD5 310 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 PIWIL2Q8TC59 973 aaKnown RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 C7orf26Q96N11 449 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 CSF3RQ99062 836 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ALOXE3Q9BYJ1 711 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 C20orf27Q9GZN8 174 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ZNF700Q9H0M5 742 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 TUBB1Q9H4B7 451 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 GIMAP4Q9NUV9 329 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 PNPOQ9NVS9 261 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 EIF3LQ9Y262 564 aaKnown RBP11.11□□□□□ -0.63
SNCA-202ENST00000345009 CCL27Q9Y4X3 112 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 KCNMB2Q9Y691 235 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 ZNF780BQ9Y6R6 833 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 SPTA1P02549 2419 aa11.11□□□□□ -0.63
SNCA-202ENST00000345009 LOC400499M0QZD8 3231 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 ITPR1Q14643 2758 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 SCN2AQ99250 2005 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 IGHV1-45A0A0A0MS14 117 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 LSM1O15116 133 aaKnown RBP11.1□□□□□ -0.63
SNCA-202ENST00000345009 OR10H2O60403 315 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 PEX11AO75192 247 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 GPR75O95800 540 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 AIFM1O95831 613 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 FURINP09958 794 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 KITP10721 976 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 ALDH9A1P49189 494 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 RPL38P63173 70 aaKnown RBP11.1□□□□□ -0.63
SNCA-202ENST00000345009 PLIN5Q00G26 463 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 EEF1A2Q05639 463 aaKnown RBP11.1□□□□□ -0.63
SNCA-202ENST00000345009 TERF2Q15554 542 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 TBR1Q16650 682 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 SFT2D3Q587I9 215 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 XKR7Q5GH72 579 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 C6orf163Q5TEZ5 329 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 CES4AQ5XG92 561 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 C18orf63Q68DL7 685 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 CLNKQ7Z7G1 428 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 KBTBD2Q8IY47 623 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 FNDC5Q8NAU1 212 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 C16orf78Q8WTQ4 265 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
SNCA-202ENST00000345009 TSLPQ969D9 159 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 C8orf44Q96CB5 159 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 TM4SF18Q96CE8 201 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 C11orf24Q96F05 449 aaPredicted RBP11.1□□□□□ -0.63
SNCA-202ENST00000345009 DGAT2Q96PD7 388 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 ADAP2Q9NPF8 381 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 MIEF1Q9NQG6 463 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 PNO1Q9NRX1 252 aaKnown RBP11.1□□□□□ -0.63
SNCA-202ENST00000345009 EHD3Q9NZN3 535 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 MAPRE3Q9UPY8 281 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 DLGAP4Q9Y2H0 992 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 PCDHA9Q9Y5H5 950 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 ZFHX4Q86UP3 3567 aa11.1□□□□□ -0.63
SNCA-202ENST00000345009 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ATP6AP2A0A1C7CYW4 349 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 OR2W5A6NFC9 320 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 GLOD5A6NK44 160 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ERVH48-1M5A8F1 160 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 LDB3O75112 727 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ATP6AP2O75787 350 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 TGDSO95455 350 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ALPPP05187 535 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 PRPS2P11908 318 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 COX6A1P12074 109 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 CSNK2A2P19784 350 aaPredicted RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 RPL3P39023 403 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 CCL11P51671 97 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 XKP51811 444 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 RAE1P78406 368 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 FOLH1Q04609 750 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 EMX2Q04743 252 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 C2orf80Q0P641 193 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 KIAA0040Q15053 153 aa11.09□□□□□ -0.63
SNCA-202ENST00000345009 ELAVL1Q15717 326 aaKnown RBP11.09□□□□□ -0.63
SNCA-202ENST00000345009 RFTN2Q52LD8 501 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms