RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RTN4RL1Q86UN2 441 aaPredicted RBP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 AMIGO1Q86WK6 493 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 OR6K6Q8NGW6 343 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 SNX33Q8WV41 574 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 RFKQ969G6 155 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 OR10H1Q9Y4A9 318 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 PCDHGA3Q9Y5H0 932 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 ENPP4Q9Y6X5 453 aa11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 ZFC3H1O60293 1989 aaKnown RBP11.88□□□□□ -0.51
SNRNP48-201ENST00000342415 CHURC1-FNTBB4DL54 471 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 OXA1LQ15070 435 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 FRMPD2BQ6IN97 320 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF852Q6ZMS4 543 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 WDR53Q7Z5U6 358 aaPredicted RBP11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 OR4K5Q8NGD3 323 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 GRPEL2Q8TAA5 225 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 TAS2R7Q9NYW3 318 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 CNIH4Q9P003 139 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 EXTL2Q9UBQ6 330 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 IL36AQ9UHA7 158 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 CDH7Q9ULB5 785 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 HSPE1-MOB4S4R3N1 261 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 C1QTNF3-AMACRE9PGA6 284 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 INMT-MINDY4F8WBC2 141 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 AREL1O15033 823 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 NDUFS4O43181 175 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 CPNE6O95741 557 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 TSPAN12O95859 305 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 IFNA16P05015 189 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 PRR5P85299 388 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 ODF4Q2M2E3 257 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 HSD11B1LQ7Z5J1 315 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 SAMD12Q8N8I0 201 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 RASSF5Q8WWW0 418 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 NUS1Q96E22 293 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 DUS3LQ96G46 650 aaKnown RBP11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 NELL2Q99435 816 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 SRRDQ9UH36 339 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 FBXO10Q9UK96 956 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 IKZF2Q9UKS7 526 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 B3GNT3Q9Y2A9 372 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF860A6NHJ4 632 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 PTTG1O95997 202 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 PRNPP04156 253 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 HTR2BP41595 481 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 AP2S1P53680 142 aaPredicted RBP11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 TPGS2Q68CL5 300 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 PRR23CQ6ZRP0 262 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 FAM92BQ6ZTR7 304 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 LYSMD2Q8IV50 215 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 LAX1Q8IWV1 398 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 RIMKLAQ8IXN7 391 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 ATP6V1C2Q8NEY4 427 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 OR8J1Q8NGP2 316 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 OR14C36Q8NHC7 312 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC7A5P2Q9GIP4 190 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 ACTL8Q9H568 366 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 TDP1Q9NUW8 608 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 CLEC4EQ9ULY5 219 aa11.87□□□□□ -0.51
SNRNP48-201ENST00000342415 IGLV3-10A0A075B6K4 115 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 TEX28O15482 410 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 CHST10O43529 356 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 KELP23276 732 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 GPR4P46093 362 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC9A3P48764 834 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 TGM4P49221 684 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SUOXP51687 545 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 FCHO2Q0JRZ9 810 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 KLBQ86Z14 1044 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 DNAJC22Q8N4W6 341 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 OR6C4Q8NGE1 309 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 C16orf78Q8WTQ4 265 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 DPF3Q92784 378 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 MRPL15Q9P015 296 aaKnown RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC9A3R1O14745 358 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ANKRD28O15084 1053 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 OR2B3O76000 313 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ALPPP05187 535 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 GSTM4Q03013 218 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PAMR1Q6UXH9 720 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 DENND6BQ8NEG7 585 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 OR51A7Q8NH64 312 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ASB11Q8WXH4 323 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 NDOR1Q9UHB4 597 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 CLEC2DQ9UHP7 191 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SESN1Q9Y6P5 492 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ALPK2Q86TB3 2170 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ARHGAP33O14559 1287 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PAK4O96013 591 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 GASTP01350 101 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ITGAMP11215 1152 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 JUNBP17275 347 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 RHCEP18577 417 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ACVR1BP36896 505 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms