RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 HDAC8Q9BY41 377 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 FAUP35544 74 aaKnown RBP18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 GNPDA2Q8TDQ7 276 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 HHATLQ9HCP6 504 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 TCF7L1Q9HCS4 588 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 CENPMQ9NSP4 180 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 MAGP20916 626 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 FCHO2Q0JRZ9 810 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 NPTX1Q15818 432 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 RASGEF1AQ8N9B8 481 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 ZSCAN1Q8NBB4 408 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 EZH1Q92800 747 aaPredicted RBP18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 OSTF1Q92882 214 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 TMEM138Q9NPI0 162 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 CPNE7Q9UBL6 633 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 ADAMTS6Q9UKP5 1117 aa18.71■□□□□ 0.59
SEMA6C-201ENST00000341697 HOXC11O43248 304 aaPredicted RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 F3P13726 295 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 RORAP35398 523 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 TXNL4AP83876 142 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 CYP27C1Q4G0S4 372 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 LIN54Q6MZP7 749 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 PARM1Q6UWI2 310 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 TMCO6Q96DC7 493 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 SEC61A2Q9H9S3 476 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 DMRT3Q9NQL9 472 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 NFKBIL1Q9UBC1 381 aaPredicted RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 SCO2O43819 266 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 SOX14O95416 240 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 C1orf105O95561 183 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 NR4A1P22736 598 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 PDPRQ8NCN5 879 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 OR52P1PQ8NH57 321 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 DIRAS2Q96HU8 199 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 NTMT1Q9BV86 223 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 PBX4Q9BYU1 374 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 EHD1Q9H4M9 534 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 FAM53CQ9NYF3 392 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 GRHPRQ9UBQ7 328 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 GPC6Q9Y625 555 aaPredicted RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 C17orf113A0A1B0GUU1 675 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 ANXA2P2A6NMY6 339 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 ANXA2P07355 339 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 RPS26P62854 115 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 IL18Q14116 193 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 NR0B2Q15466 257 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 SWT1Q5T5J6 900 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 CLECL1Q8IZS7 167 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 OR6N1Q8NGY5 312 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 LPAR4Q99677 370 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 FANCFQ9NPI8 374 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 TSC22D4Q9Y3Q8 395 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 MAU2Q9Y6X3 613 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 XIRP1Q702N8 1843 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 EVPLQ92817 2033 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 CYB5AP00167 134 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 CHRM5P08912 532 aaPredicted RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 RPL34P49207 117 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 ARHGAP9Q9BRR9 750 aa18.7■□□□□ 0.58
SEMA6C-201ENST00000341697 TLX2O43763 284 aaPredicted RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 CTHP32929 405 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 EIF2DP41214 584 aaKnown RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 VLDLRP98155 873 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 PPP2R2BQ00005 443 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 RCAN2Q14206 197 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 TPRG1LQ5T0D9 272 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 BTN2A1Q7KYR7 527 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 SLC22A8Q8TCC7 542 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ADAD1Q96M93 576 aaKnown RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 NKX1-2Q9UD57 310 aaPredicted RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ACSL6Q9UKU0 697 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 MXD1Q05195 221 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 UGT3A2Q3SY77 523 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ZNF551Q7Z340 670 aaPredicted RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ZNF676Q8N7Q3 588 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 CA5BQ9Y2D0 317 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 BCAT2O15382 392 aaPredicted RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 IL12AP29459 219 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 TIGD6Q17RP2 521 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 KIAA1614Q5VZ46 1190 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ADNP2Q6IQ32 1131 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 TMEFF1Q8IYR6 380 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 WFDC5Q8TCV5 224 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 CHFRQ96EP1 664 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 IDH3BO43837 385 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 CDKL1Q00532 357 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 RASGEF1BQ0VAM2 473 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 IL18R1Q13478 541 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 RNF220Q5VTB9 566 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 OR2L5Q8NG80 312 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 OR6C4Q8NGE1 309 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ZNF480Q8WV37 535 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 CRELD1Q96HD1 420 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 CMKLR1Q99788 373 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 DPH2Q9BQC3 489 aaPredicted RBP18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 ABCB9Q9NP78 766 aa18.69■□□□□ 0.58
SEMA6C-201ENST00000341697 SOX1O00570 391 aaPredicted RBP18.68■□□□□ 0.58
SEMA6C-201ENST00000341697 DOK4Q8TEW6 326 aa18.68■□□□□ 0.58
SEMA6C-201ENST00000341697 PPP4R1LQ9P1A2 415 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms