RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 PTCHD3Q3KNS1 767 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF542PQ5EBM4 170 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FHL5Q5TD97 284 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MROH9Q5TGP6 573 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CES4AQ5XG92 561 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 GTF2H2CQ6P1K8 395 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 DUS1LQ6P1R4 473 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 IGFL2Q6UWQ7 119 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CBLL1Q75N03 491 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CCDC25Q86WR0 208 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM48Q8IWZ4 208 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FBXO39Q8N4B4 442 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TBC1D19Q8N5T2 526 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 OR1L3Q8NH93 324 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF473Q8WTR7 871 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 NEIL2Q969S2 332 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MUL1Q969V5 352 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF566Q969W8 418 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MTERF3Q96E29 417 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 VMP1Q96GC9 406 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HIST1H2AHQ96KK5 128 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SERPINI1Q99574 410 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HIST1H2AJQ99878 128 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 H2AFJQ9BTM1 129 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TBCDQ9BTW9 1192 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FANCEQ9HB96 536 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MRPS30Q9NP92 439 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 DLL4Q9NR61 685 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 IMP3Q9NV31 184 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HRASLS2Q9NWW9 162 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 LYARQ9NX58 379 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TMEM9Q9P0T7 183 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FBXL7Q9UJT9 491 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TMCC3Q9ULS5 477 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 RUVBL2Q9Y230 463 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MMACHCQ9Y4U1 282 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ASB1Q9Y576 335 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 KCNE2Q9Y6J6 123 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 IKBKGQ9Y6K9 419 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FER1L5A0AVI2 2057 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 A0A1B0GX78 115 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CCDC78A2IDD5 438 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM64A6NGJ6 449 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM64BA6NI03 449 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 PDZK1P1A8MUH7 402 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 FOXO6A8MYZ6 492 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 UBXN8O00124 270 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 SYT5O00445 386 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 UBFD1O14562 309 aaKnown RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 COPEO14579 308 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 FOXS1O43638 330 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 GALR3O60755 368 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM13O60858 407 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CLDN9O95484 217 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 UROSP10746 265 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 MYL2P10916 166 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CPA3P15088 417 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 KRT4P19013 534 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 BSGP35613 385 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 GFERP55789 205 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ABRQ12979 859 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 LY6DQ14210 128 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CSHL1Q14406 222 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 GRM7Q14831 915 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 KIAA0040Q15053 153 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 TCTN3Q6NUS6 607 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 BORAQ6PGQ7 559 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 B3GNT8Q7Z7M8 397 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 C17orf64Q86WR6 236 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF655Q8N720 491 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 AMER3Q8N944 861 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CAMKVQ8NCB2 501 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 SRFBP1Q8NEF9 429 aaKnown RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 C17orf47Q8NEP4 570 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ACTRT2Q8TDY3 377 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 UTP15Q8TED0 518 aaKnown RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CKAP2Q8WWK9 683 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 MS4A6EQ96DS6 147 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 MAP3K3Q99759 626 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 CMKLR1Q99788 373 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 AIF1LQ9BQI0 150 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ASPNQ9BXN1 380 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 RNF32Q9H0A6 362 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ALG9Q9H6U8 611 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 LANCL2Q9NS86 450 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ARL15Q9NXU5 204 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 KCMF1Q9P0J7 381 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 OPTCQ9UBM4 332 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF639Q9UID6 485 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 DNAJC16Q9Y2G8 782 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF281Q9Y2X9 895 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 SNRNP200O75643 2136 aaKnown RBP3.29□□□□□ -1.88
CCDC66-202ENST00000341455 PRAMEF33A0A0G2JMD5 474 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 LRIT2A6NDA9 550 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 AQP12BA6NM10 295 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 WASHC1A8K0Z3 465 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 ISM1B1AKI9 464 aa3.29□□□□□ -1.88
CCDC66-202ENST00000341455 E7EQ34 232 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms