RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 FBXO27Q8NI29 283 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 MCOLN3Q8TDD5 553 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 ABTB1Q969K4 478 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-201ENST00000340660 VMP1Q96GC9 406 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 JSRP1Q96MG2 331 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-201ENST00000340660 PTCHD1Q96NR3 888 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 COPS8Q99627 209 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 RBM4BQ9BQ04 359 aaKnown RBP9.96□□□□□ -0.82
ATXN3-201ENST00000340660 PIMREGQ9BSJ6 248 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 FAM96AQ9H5X1 160 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 SAMD15Q9P1V8 674 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 VTI1BQ9UEU0 232 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 CRLS1Q9UJA2 301 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 PKP3Q9Y446 797 aa9.96□□□□□ -0.82
ATXN3-201ENST00000340660 STAB2Q8WWQ8 2551 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 IGLV3-16A0A075B6K0 115 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 IGKV3D-11A0A0A0MRZ8 115 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 SHISA3A0PJX4 238 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 ANKRD62A6NC57 917 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF860A6NHJ4 632 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 TXNDC9O14530 226 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 PHF2O75151 1096 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 TRAPPC6AO75865 159 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 MYO1DO94832 1006 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 ACSL3O95573 720 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 MAOAP21397 527 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 KIR2DL2P43627 348 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-201ENST00000340660 XIAPP98170 497 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF844Q08AG5 666 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 EXOC3L4Q17RC7 722 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 IQCCQ4KMZ1 466 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 GBP6Q6ZN66 633 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 SPATA22Q8NHS9 363 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 HSPH1Q92598 858 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 TSGA13Q96PP4 275 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 SLC6A7Q99884 636 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 MACROD1Q9BQ69 325 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 SUCNR1Q9BXA5 334 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 ASPNQ9BXN1 380 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 RSPO3Q9BXY4 272 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-201ENST00000340660 CISD1Q9NZ45 108 aaKnown RBP9.95□□□□□ -0.82
ATXN3-201ENST00000340660 SLC39A10Q9ULF5 831 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 PPIEQ9UNP9 301 aaKnown RBP9.95□□□□□ -0.82
ATXN3-201ENST00000340660 SCN3AQ9NY46 2000 aa9.95□□□□□ -0.82
ATXN3-201ENST00000340660 LCE6AA0A183 80 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 KCNK1O00180 336 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 PPP1R12AO14974 1030 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-201ENST00000340660 HPNP05981 417 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 SYT1P21579 422 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-201ENST00000340660 IL10P22301 178 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 PSMA2P25787 234 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 CDK9P50750 372 aaKnown RBP9.94□□□□□ -0.82
ATXN3-201ENST00000340660 DVL1P1P54792 670 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-201ENST00000340660 NAGLUP54802 743 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 CDH15P55291 814 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 MEF2AQ02078 507 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-201ENST00000340660 MAMLD1Q13495 774 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 PWP1Q13610 501 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 EIPR1Q53HC9 387 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 AGAP6Q5VW22 663 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 DPY19L2P1Q6NXN4 242 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 DCUN1D3Q8IWE4 304 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 BLOC1S5Q8TDH9 187 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 ELMO1Q92556 727 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 TBC1D20Q96BZ9 403 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 FOXN4Q96NZ1 517 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 PCDHB18PQ96TA0 734 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 CCDC77Q9BR77 488 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 ACAT2Q9BWD1 397 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 UBQLN3Q9H347 655 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 NECTIN3Q9NQS3 549 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 PCYOX1Q9UHG3 505 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 PPIAL4AQ9Y536 164 aa9.94□□□□□ -0.82
ATXN3-201ENST00000340660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATXN3-201ENST00000340660 ESYT3A0FGR9 886 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 H0Y3Z8 333 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 GFYI3L273 518 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 NDUFS8O00217 210 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 LRATO95237 230 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 C1QAP02745 245 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 CRHP06850 196 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 GSTM1P09488 218 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 MED14OSP0DP75 135 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 CPN1P15169 458 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 CDKN1CP49918 316 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-201ENST00000340660 PDLIM4P50479 330 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 EFNA4P52798 201 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 C21orf58P58505 322 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 SIRPAP78324 504 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 SRYQ05066 204 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 EXOC3L2Q2M3D2 409 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 DNAJC21Q5F1R6 531 aaKnown RBP9.93□□□□□ -0.82
ATXN3-201ENST00000340660 SLC22A10Q63ZE4 541 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF425Q6IV72 752 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 CCDC70Q6NSX1 233 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 STAC2Q6ZMT1 411 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 QSOX2Q6ZRP7 698 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 MON1BQ7L1V2 547 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms