RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 PSIP1O75475 530 aaKnown RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 ERAL1O75616 437 aaKnown RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 C1GALT1C1LP0DN25 315 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 ZNF24P17028 368 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 BUD31P41223 144 aaPredicted RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 RORCP51449 518 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 MAPK12P53778 367 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 ATAT1Q5SQI0 421 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 SYT14Q8NB59 555 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 SLC38A5Q8WUX1 472 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 PIK3R3Q92569 461 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 ART5Q96L15 291 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 FYTTD1Q96QD9 318 aaKnown RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 MCCC1Q96RQ3 725 aaPredicted RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 SDHCQ99643 169 aaPredicted RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 BHLHE41Q9C0J9 482 aaPredicted RBP13.71□□□□□ -0.22
CPSF7-201ENST00000340437 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 HHATLQ9HCP6 504 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 DMRT3Q9NQL9 472 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 FABP12A6NFH5 140 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 H3BQ06 376 aaPredicted RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 FRS3O43559 492 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 NTN1O95631 604 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 REEP3Q6NUK4 255 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ARMC5Q96C12 935 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ECHDC3Q96DC8 303 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 TM9SF2Q99805 663 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 TMEM246Q9BRR3 403 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 MVB12BQ9H7P6 319 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 SRRDQ9UH36 339 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ITGB1BP2Q9UKP3 347 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 TBC1D24Q9ULP9 559 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 WDR87Q6ZQQ6 2873 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ANHXE9PGG2 379 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 PRKRAO75569 313 aaKnown RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 OR12D1P0DN82 309 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 GABRB1P18505 474 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 TIE1P35590 1138 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 GPR1P46091 355 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 SNAPC1Q16533 368 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 SYPL1Q16563 259 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ZNF544Q6NX49 715 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 HTR3DQ70Z44 454 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 GALNT12Q8IXK2 581 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 REPS1Q96D71 796 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 MAPKAP1Q9BPZ7 522 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 RACGAP1Q9H0H5 632 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 GULP1Q9UBP9 304 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 TAC3Q9UHF0 121 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 C1orf105O95561 183 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 NR2F1P10589 423 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 RHCEP18577 417 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 CD72P21854 359 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 PSMB5P28074 263 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 WASP42768 502 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 DGKGP49619 791 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 C1DQ13901 141 aaKnown RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ZNF630Q2M218 657 aaPredicted RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 CRTC2Q53ET0 693 aaPredicted RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 ABI3BPQ7Z7G0 1075 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 SLC5A11Q8WWX8 675 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 TMEM80Q96HE8 168 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 QRSL1Q9H0R6 528 aaKnown RBP13.7□□□□□ -0.22
CPSF7-201ENST00000340437 EQTNQ9NQ60 294 aa13.7□□□□□ -0.22
CPSF7-201ENST00000340437 A0A1W2PQL4 384 aaPredicted RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 PPM1DO15297 605 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 MRPS14O60783 128 aaKnown RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 ATP6V1E1P36543 226 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 CCR2P41597 374 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 RAB33AQ14088 237 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 TMEM215Q68D42 235 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 LHX8Q68G74 356 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 EFHD2Q96C19 240 aaPredicted RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 HHIPQ96QV1 700 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 TBC1D17Q9HA65 648 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 BRF2Q9HAW0 419 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 RANGRFQ9HD47 186 aaPredicted RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 CCDC177Q9NQR7 707 aaPredicted RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 TAAR2Q9P1P5 351 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 HS3ST2Q9Y278 367 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 HCFC2Q9Y5Z7 792 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 CLCA3PQ9Y6N3 262 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 H7BY64 318 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 MMP20O60882 483 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 GUCY1B2O75343 617 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 H1F0P07305 194 aaKnown RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 CTSLP07711 333 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 RNF144AP50876 292 aaPredicted RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 NTHL1P78549 312 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 ZNF91Q05481 1191 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 HEPACAMQ14CZ8 416 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms