RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DNAJB14Q8TBM8 379 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 PAIP2Q9BPZ3 127 aaKnown RBP14.25□□□□□ -0.13
UBE3B-201ENST00000340074 WDR41Q9HAD4 459 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 MCM8Q9UJA3 840 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 TRAF6Q9Y4K3 522 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 DNAJC15Q9Y5T4 150 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 PTGDR2Q9Y5Y4 395 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 PGRMC2O15173 223 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 PCDH7O60245 1069 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 BGNP21810 368 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 SOX11P35716 441 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ACSM2AQ08AH3 577 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 MFAP5Q13361 173 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 AGBL2Q5U5Z8 902 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ACSM2BQ68CK6 577 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 FCRLBQ6BAA4 426 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 H3F3CQ6NXT2 135 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 CLYBLQ8N0X4 340 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 MMP21Q8N119 569 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 B3GNT7Q8NFL0 401 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ELP5Q8TE02 316 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 PTPMT1Q8WUK0 201 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TM9SF4Q92544 642 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ARL8AQ96BM9 186 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TM4SF18Q96CE8 201 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 C11orf24Q96F05 449 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 LMF1Q96S06 567 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 MFRPQ9BY79 579 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TUBB1Q9H4B7 451 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ZDHHC2Q9UIJ5 367 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 CCL27Q9Y4X3 112 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 CSAG2Q9Y5P2 127 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 HEMK1Q9Y5R4 338 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 CLCA3PQ9Y6N3 262 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 GNG14A0A1W2PPG7 69 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 C17orf105B2RV13 164 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 SUV39H1O43463 412 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ITM2AO43736 263 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 GUCY1B2O75343 617 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 LYPLA1O75608 230 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 RSL1D1O76021 490 aaKnown RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 GPR75O95800 540 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 CHEK2O96017 543 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 SERPINE1P05121 402 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 NEFHP12036 1026 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TNNI3P19429 210 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TIA1P31483 386 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 WDR4P57081 412 aaKnown RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TRA2BP62995 288 aaKnown RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 UGT3A2Q3SY77 523 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 HHATQ5VTY9 493 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 OR52E8Q6IFG1 317 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 PRICKLE2Q7Z3G6 844 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TMEM132CQ8N3T6 1108 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ZADH2Q8N4Q0 377 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 APCDD1LQ8NCL9 501 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 MGARPQ8TDB4 240 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 TWIST2Q8WVJ9 160 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 PPWD1Q96BP3 646 aaKnown RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 DGAT2Q96PD7 388 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 EBPLQ9BY08 206 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ZNF395Q9H8N7 513 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-201ENST00000340074 SIRT5Q9NXA8 310 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 ANAPC2Q9UJX6 822 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 PCDHA9Q9Y5H5 950 aa14.24□□□□□ -0.13
UBE3B-201ENST00000340074 EML6Q6ZMW3 1958 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 C1orf226A1L170 272 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 SLC28A1O00337 649 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 HSPA4LO95757 839 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 LINC00032P0C843 101 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 ALOX15P16050 662 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-201ENST00000340074 STT3AP46977 705 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 GPR143P51810 404 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 SLC18A1P54219 525 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 TAS2R50P59544 299 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 BIKQ13323 160 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 ABHD17BQ5VST6 288 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 SLC6A19Q695T7 634 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 GALNT18Q6P9A2 607 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 DGAT2L6Q6ZPD8 337 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 RNF165Q6ZSG1 346 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 Q6ZSR9 355 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 CRLF3Q8IUI8 442 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 C7orf57Q8NEG2 295 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 OR2T11Q8NH01 316 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 OR14A16Q8NHC5 309 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 DAZLQ92904 295 aaKnown RBP14.23□□□□□ -0.13
UBE3B-201ENST00000340074 NCLNQ969V3 563 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 VMP1Q96GC9 406 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 RBM18Q96H35 190 aaKnown RBP14.23□□□□□ -0.13
UBE3B-201ENST00000340074 ZNF354BQ96LW1 612 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 NPAS2Q99743 824 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 VIPAS39Q9H9C1 493 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 PLA2G3Q9NZ20 509 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 STMN3Q9NZ72 180 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 TEKT2Q9UIF3 430 aa14.23□□□□□ -0.13
UBE3B-201ENST00000340074 ZNF223Q9UK11 482 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-201ENST00000340074 PPIEQ9UNP9 301 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms