RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 FAM32AQ9Y421 112 aaKnown RBP15.51■□□□□ 0.07
LITAF-201ENST00000339430 DNAH14Q0VDD8 3507 aa15.51■□□□□ 0.07
LITAF-201ENST00000339430 VEGFDO43915 354 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 GADD45GO95257 159 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 STSP08842 583 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 BMP4P12644 408 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 ITGA2P17301 1181 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 KELP23276 732 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 XCR1P46094 333 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 MAPK12P53778 367 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 PCBP3P57721 371 aaKnown RBP15.5■□□□□ 0.07
LITAF-201ENST00000339430 INAQ16352 499 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 PUS10Q3MIT2 529 aaKnown RBP15.5■□□□□ 0.07
LITAF-201ENST00000339430 CRB2Q5IJ48 1285 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 AGBL4Q5VU57 503 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 UBE2UQ5VVX9 321 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 UNC5DQ6UXZ4 953 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 C17orf64Q86WR6 236 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 RHOXF1Q8NHV9 184 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 RAB7BQ96AH8 199 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 MTERF3Q96E29 417 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 PIP5K1AQ99755 562 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 ZNF556Q9HAH1 456 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 B3GNT3Q9Y2A9 372 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 HEATR5BQ9P2D3 2071 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 A0A0G2JN53 185 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 H7BY64 318 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 M0R082 166 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 SH3BP5O60239 455 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 BCHEP06276 602 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 CLK1P49759 484 aaKnown RBP15.5■□□□□ 0.07
LITAF-201ENST00000339430 HSPB3Q12988 150 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 ZNF605Q86T29 641 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 DCUN1D3Q8IWE4 304 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 HORMAD2Q8N7B1 307 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 AQP11Q8NBQ7 271 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 PHF10Q8WUB8 498 aaKnown RBP15.5■□□□□ 0.07
LITAF-201ENST00000339430 RAB8BQ92930 207 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 ZHX1-C8orf76Q96EF9 292 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 VMP1Q96GC9 406 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 PRAP1Q96NZ9 151 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 BTBD2Q9BX70 525 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 WDR12Q9GZL7 423 aaKnown RBP15.5■□□□□ 0.07
LITAF-201ENST00000339430 IMPAD1Q9NX62 359 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 CA14Q9ULX7 337 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 DUSP12Q9UNI6 340 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 SNX11Q9Y5W9 270 aa15.5■□□□□ 0.07
LITAF-201ENST00000339430 CLCA1A8K7I4 914 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 MRPS14O60783 128 aaKnown RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 RECKO95980 971 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 UQCRC2P22695 453 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 SERPINB10P48595 397 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 MANFP55145 182 aaKnown RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 TAS2R38P59533 333 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 TIGD6Q17RP2 521 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 TRIM16LQ309B1 348 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 TMEM52BQ4KMG9 183 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 KHDRBS2Q5VWX1 349 aaKnown RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 PAGE2Q7Z2X7 111 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 ARMC8Q8IUR7 673 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 GANCQ8TET4 914 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 UCN3Q969E3 161 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 PPP1R14BQ96C90 147 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 ALPK1Q96QP1 1244 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 ZNF717Q9BY31 904 aaPredicted RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 EPS8L2Q9H6S3 715 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 TMEM247A6NEH6 219 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 IGLON5A6NGN9 336 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 IFNA14P01570 189 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 CDK1P06493 297 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 POU1F1P28069 291 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 CTSKP43235 329 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 CSNK2BP67870 215 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 IFITM3Q01628 133 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 MLF2Q15773 248 aaPredicted RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 FBXO43Q4G163 708 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 IKBIPQ70UQ0 350 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 MYDGFQ969H8 173 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 SLC38A4Q969I6 547 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 EXOSC8Q96B26 276 aaKnown RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 TM4SF18Q96CE8 201 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 MSANTD3Q96H12 275 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 SLIRPQ9GZT3 109 aaKnown RBP15.49■□□□□ 0.07
LITAF-201ENST00000339430 FBXL12Q9NXK8 326 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 TAS2R16Q9NYV7 291 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 ENPP4Q9Y6X5 453 aa15.49■□□□□ 0.07
LITAF-201ENST00000339430 C5orf58C9J3I9 102 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 AIREO43918 545 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 CCNB2O95067 398 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 PCDH8O95206 1070 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 GASTP01350 101 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 STATHP02808 62 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 DNTTP04053 509 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 DDCP20711 480 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 GADD45AP24522 165 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 BCAP31P51572 246 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 LIM2P55344 173 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 PUM1Q14671 1186 aaKnown RBP eCLIP15.48■□□□□ 0.07
LITAF-201ENST00000339430 PTGES3Q15185 160 aaKnown RBP15.48■□□□□ 0.07
LITAF-201ENST00000339430 DEPDC1Q5TB30 811 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms