RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PHF11Q9UIL8 331 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 SPACA6W5XKT8 324 aa14.22□□□□□ -0.13
PRKN-201ENST00000338468 CRYBG3Q68DQ2 2970 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 CELSR2Q9HCU4 2923 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 TLDC2A0PJX2 215 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 SYNDIG1LA6NDD5 238 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 MANBAO00462 879 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 NEURL1O76050 574 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 AIFM1O95831 613 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 IFNA16P05015 189 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 MYL2P10916 166 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 CHN1P15882 459 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 CCT5P48643 541 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 HTR6P50406 440 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 CLCN2P51788 898 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 FOLH1Q04609 750 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 LCP2Q13094 533 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 SERTAD2Q14140 314 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 ZNF787Q6DD87 383 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 SPINK14Q6IE38 97 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 GPRIN3Q6ZVF9 776 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 TRABD2AQ86V40 505 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 METTL4Q8N3J2 472 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 TMEM132CQ8N3T6 1108 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 FAR1Q8WVX9 515 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 SELENOMQ8WWX9 145 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 VMP1Q96GC9 406 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 UTP23Q9BRU9 249 aaKnown RBP14.21□□□□□ -0.13
PRKN-201ENST00000338468 DEFB126Q9BYW3 111 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 TRIM45Q9H8W5 580 aaPredicted RBP14.21□□□□□ -0.13
PRKN-201ENST00000338468 TEX10Q9NXF1 929 aaPredicted RBP14.21□□□□□ -0.13
PRKN-201ENST00000338468 LGALS13Q9UHV8 139 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 ADAM29Q9UKF5 820 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 GRID1Q9ULK0 1009 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 SNX6Q9UNH7 406 aa14.21□□□□□ -0.13
PRKN-201ENST00000338468 CACNA1DQ01668 2161 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 ANKRD17O75179 2603 aaKnown RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 GLOD5A6NK44 160 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 C17orf105B2RV13 164 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 MLYCDO95822 493 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 KLK1P06870 262 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 NR2F6P10588 404 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 TRHRP34981 398 aaPredicted RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 DCTP40126 519 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 STT3AP46977 705 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 SRSF11Q05519 484 aaKnown RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 OR1C1Q15619 314 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 INAQ16352 499 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 CCDC153Q494R4 210 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 ZNF766Q5HY98 468 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 CYP20A1Q6UW02 462 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 C16orf47Q6ZP98 133 aaPredicted RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 COMMD6Q7Z4G1 85 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 RIBC1Q8N443 379 aaPredicted RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 MORN4Q8NDC4 146 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 OR14A16Q8NHC5 309 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 SLC2A12Q8TD20 617 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 AGAP11Q8TF27 550 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 THAP3Q8WTV1 239 aaPredicted RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 TANKQ92844 425 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 DAZLQ92904 295 aaKnown RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 PPWD1Q96BP3 646 aaKnown RBP14.2□□□□□ -0.14
PRKN-201ENST00000338468 SCMH1Q96GD3 660 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 KCNA7Q96RP8 456 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 SLX1AQ9BQ83 275 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 BRF2Q9HAW0 419 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 AGPAT4Q9NRZ5 378 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 MKS1Q9NXB0 559 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 ABI3Q9P2A4 366 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 RAB21Q9UL25 225 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 SLC12A4Q9UP95 1085 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 CLCA3PQ9Y6N3 262 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 HIVEP3Q5T1R4 2406 aa14.2□□□□□ -0.14
PRKN-201ENST00000338468 A0A1W2PS29 197 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 HRKO00198 91 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 COPEO14579 308 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 PGRMC2O15173 223 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 WISP2O76076 250 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 ESRRBO95718 433 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 GPR75O95800 540 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 TLX1P31314 330 aaPredicted RBP14.19□□□□□ -0.14
PRKN-201ENST00000338468 BUD31P41223 144 aaPredicted RBP14.19□□□□□ -0.14
PRKN-201ENST00000338468 TDGF1P3P51864 188 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 NAGLUP54802 743 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 FOXA1P55317 472 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 PKNOX1P55347 436 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 DNAJB13P59910 316 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 PMP22Q01453 160 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 EIF2S3LQ2VIR3 472 aaKnown RBP14.19□□□□□ -0.14
PRKN-201ENST00000338468 FRMD7Q6ZUT3 714 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 MREGQ8N565 214 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 BANPQ8N9N5 519 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 RDH11Q8TC12 318 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 ZNF721Q8TF20 911 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 CCDC126Q96EE4 140 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 ACPTQ9BZG2 426 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 OR8D2Q9GZM6 311 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 LIN28AQ9H9Z2 209 aaKnown RBP14.19□□□□□ -0.14
PRKN-201ENST00000338468 TNFRSF12AQ9NP84 129 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms