RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 LSMEM1Q8N8F7 131 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 LRRN3Q9H3W5 708 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 PIGUQ9H490 435 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 ZCCHC3Q9NUD5 404 aaKnown RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 CLEC2DQ9UHP7 191 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 FAM170BA6NMN3 283 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 J3KTA2 159 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 KPNA3O00505 521 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 SGCEO43556 437 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 LDB2O43679 373 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 FGBP02675 491 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 TACR1P25103 407 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 UGT2B10P36537 528 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 KIAA1024LP59773 190 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 PRKCZQ05513 592 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 FADDQ13158 208 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 C17orf107Q6ZR85 190 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 MTSS1LQ765P7 747 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 PIANPQ8IYJ0 282 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 PJA1Q8NG27 643 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 OR52P1PQ8NH57 321 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 ST8SIA4Q92187 359 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 R3HDMLQ9H3Y0 253 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 IKZF5Q9H5V7 419 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 TEX10Q9NXF1 929 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 A0A1W2PPL8 197 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 B4DXG7 233 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 STBD1O95210 358 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 SSR2P43308 183 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 HOXC5Q00444 222 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 EIF4HQ15056 248 aaKnown RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 SF3A2Q15428 464 aaKnown RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 USP51Q70EK9 711 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 YIPF6Q96EC8 236 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 CPNE2Q96FN4 548 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 C7orf50Q9BRJ6 194 aaKnown RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-201ENST00000337299 XKR8Q9H6D3 395 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 NIPAL2Q9H841 368 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 B3GNT2Q9NY97 397 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 OSGIN1Q9UJX0 560 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
COL2A1-201ENST00000337299 AOC2O75106 756 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 MTRF1O75570 445 aaKnown RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 B3GALT4O96024 378 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 PSMD8P48556 350 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 TPMTP51580 245 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CHRNEQ04844 493 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CRYZQ08257 329 aaKnown RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 KANSL1Q7Z3B3 1105 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 NKD1Q969G9 470 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 S100PBPQ96BU1 408 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 HTATIP2Q9BUP3 242 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF416Q9BWM5 594 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 OSER1Q9NX31 292 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ABHD14A-ACY1A0A1B0GW23 586 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CHMP24386 653 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 TAS2R50P59544 299 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 SMAD3P84022 425 aaKnown RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 IFITM2Q01629 132 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 TAF13Q15543 124 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ZMIZ2Q8NF64 920 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CD99L2Q8TCZ2 262 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 RELTQ969Z4 430 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CMTM7Q96FZ5 175 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 P2RY13Q9BPV8 354 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ZCCHC2Q9C0B9 1178 aaKnown RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF385DQ9H6B1 395 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 C3orf14Q9HBI5 128 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 POPDC3Q9HBV1 291 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 LOC285095A0A1B0GVY8 99 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CLDN7O95471 211 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 INHBBP09529 407 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 NAT2P11245 290 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CDKN2CP42773 168 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CAPN13Q6MZZ7 669 aaPredicted RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 CNTN4Q8IWV2 1026 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 OR10H1Q9Y4A9 318 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 LRG1P02750 347 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 MEF2AQ02078 507 aaPredicted RBP12.68□□□□□ -0.38
COL2A1-201ENST00000337299 NKG7Q16617 165 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 PRAMEF17Q5VTA0 474 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 KRT77Q7Z794 578 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 SLC30A8Q8IWU4 369 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 OR8S1Q8NH09 359 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 KCNN1Q92952 543 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 C7orf34Q96L11 122 aa12.68□□□□□ -0.38
COL2A1-201ENST00000337299 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms