RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ELP5Q8TE02 316 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 GRHL3Q8TE85 626 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 C22orf15Q8WYQ4 148 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TRIM43Q96BQ3 446 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 METTL2AQ96IZ6 378 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PKP4Q99569 1192 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 RPF2Q9H7B2 306 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM138Q9NPI0 162 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PAQR5Q9NXK6 330 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SLC22A14Q9Y267 594 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SLC35A3Q9Y2D2 325 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PCDHGA10Q9Y5H3 936 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PLSCR5A0PG75 271 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 HIDE1A8MVS5 230 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SCRG1O75711 98 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PRKCHP24723 683 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 NUBP1P53384 320 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 DNAJB13P59910 316 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ERVFC1P60507 584 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 GRIN2CQ14957 1233 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PLEKHG7Q6ZR37 379 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 OR5K1Q8NHB7 308 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ABHD5Q8WTS1 349 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SH3GL2Q99962 352 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 BRF2Q9HAW0 419 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PNPLA3Q9NST1 481 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM45AQ9NWC5 275 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 MARCH5Q9NX47 278 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 C2orf92A0A1B0GVN3 265 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 GGT3PA6NGU5 568 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SURF4O15260 269 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 RAD51DO75771 328 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 EIF2S3P41091 472 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 STK19P49842 368 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TEKQ02763 1124 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ZNF423Q2M1K9 1284 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ZNF676Q8N7Q3 588 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 NAT8LQ8N9F0 302 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TSPEARQ8WU66 669 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 KCNN1Q92952 543 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SLCO2A1Q92959 643 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 DTD2Q96FN9 168 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 DHRS4Q9BTZ2 278 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM109Q9BVC6 243 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 POLDIP3Q9BY77 421 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 CXCL16Q9H2A7 254 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 HIPK2Q9H2X6 1198 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ZNF334Q9HCZ1 680 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 GRHL1Q9NZI5 618 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 DNMT3BQ9UBC3 853 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 LGALS13Q9UHV8 139 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PADI1Q9ULC6 663 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 CXorf51AA0A1B0GTR3 108 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 IQCF5A8MTL0 148 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 HOXC11O43248 304 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ARL6IP5O75915 188 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TCEA1P23193 301 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 IL12AP29459 219 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 RPS13P62277 151 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 IRF4Q15306 451 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ZNF595Q8IYB9 648 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ARL10Q8N8L6 244 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ECHDC3Q96DC8 303 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 NARS2Q96I59 477 aaKnown RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 DPH7Q9BTV6 452 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 NUDT9Q9BW91 350 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 CFHR5Q9BXR6 569 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SLC19A3Q9BZV2 496 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 UCK2Q9BZX2 261 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 CAMK2AQ9UQM7 478 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM184BQ9Y519 407 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 LOC105369274A0A096LPK9 316 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SHISA7A6NL88 538 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SLC33A1O00400 549 aaPredicted RBP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 RGS10O43665 173 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 SDC3O75056 442 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PROCP04070 461 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 F3P13726 295 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 MYOGP15173 224 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 GRIA1P42261 906 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM52BQ4KMG9 183 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ZMAT1Q5H9K5 638 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 FAM205BPQ63HN1 556 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PYHIN1Q6K0P9 492 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ADAMTSL4Q6UY14 1074 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 LARP4Q71RC2 724 aaKnown RBP eCLIP7.03□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM25Q86YD3 366 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 OR4N4Q8N0Y3 316 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 UXS1Q8NBZ7 420 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 OR2L3Q8NG85 312 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 OR8S1Q8NH09 359 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 FBXL8Q96CD0 374 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 ABRACLQ9P1F3 81 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 PCDHGB6Q9Y5F9 930 aa7.03□□□□□ -1.28
EPHA3-201ENST00000336596 A6NLC8 198 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms