RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DUX4L5P0CJ88 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 DUX4L6P0CJ89 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 DUX4L7P0CJ90 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 C4BPBP20851 252 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 AOAHP28039 575 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 GABRB3P28472 473 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 PDHA2P29803 388 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 CSTF2P33240 577 aaKnown RBP eCLIP11.27□□□□□ -0.6
HDAC6-201ENST00000334136 STARD6P59095 220 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 NFKB2Q00653 900 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 KIR2DS5Q14953 304 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 CRTC2Q53ET0 693 aaPredicted RBP11.27□□□□□ -0.6
HDAC6-201ENST00000334136 ZCCHC10Q8TBK6 192 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 OR1E3Q8WZA6 343 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 PIK3R3Q92569 461 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 AP3S1Q92572 193 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 ZDHHC12Q96GR4 267 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 PHOX2BQ99453 314 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 CD244Q9BZW8 370 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 GAREM1Q9H706 876 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 DUX4Q9UBX2 424 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 ENTPD4Q9Y227 616 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 SPEF1Q9Y4P9 236 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 OARD1Q9Y530 152 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.6
HDAC6-201ENST00000334136 C17orf113A0A1B0GUU1 675 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 DUX1O43812 170 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 IFNW1P05000 195 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 F3P13726 295 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 HSD17B1P14061 328 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 RAB28P51157 221 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 MANFP55145 182 aaKnown RBP11.27□□□□□ -0.61
HDAC6-201ENST00000334136 ACVR1Q04771 509 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 C2orf80Q0P641 193 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 OR4D1Q15615 310 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 SMU1Q2TAY7 513 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 MZT2AQ6P582 158 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 LGI4Q8N135 537 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 ZFP90Q8TF47 636 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF419Q96HQ0 510 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-201ENST00000334136 ARMC1Q9NVT9 282 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF224Q9NZL3 707 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 TAAR2Q9P1P5 351 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 TMEM181Q9P2C4 612 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 KLHL42Q9P2K6 505 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 MRPS33Q9Y291 106 aaKnown RBP11.27□□□□□ -0.61
HDAC6-201ENST00000334136 PCDHGB3Q9Y5G1 929 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 CACNA1HO95180 2353 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 ANTXRLA6NF34 631 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 TNFRSF10CO14798 259 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 DUOXA1Q1HG43 343 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 PDZD3Q86UT5 571 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 SLC5A11Q8WWX8 675 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 FCGR1BQ92637 280 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 CAMK1GQ96NX5 476 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 SLAMF8Q9P0V8 285 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 SEC14L3Q9UDX4 400 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 SLC6A14Q9UN76 642 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 PPIL1Q9Y3C6 166 aa11.27□□□□□ -0.61
HDAC6-201ENST00000334136 STX16O14662 325 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 SLC28A2O43868 658 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 NOS1APO75052 506 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 GADD45GO95257 159 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PRPS2P11908 318 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TCEA1P23193 301 aaKnown RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PPIBP23284 216 aaKnown RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 KIAA1024LP59773 190 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 STXBP1P61764 594 aaKnown RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 CTSL3PQ5NE16 218 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 GOLGA7Q7Z5G4 137 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 GALNT7Q86SF2 657 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 DTWD1Q8N5C7 304 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 IPCEF1Q8WWN9 437 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PDXPQ96GD0 296 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 SLC30A3Q99726 388 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TMEM246Q9BRR3 403 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TTYH2Q9BSA4 534 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 DUSP23Q9BVJ7 150 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 SLC12A9Q9BXP2 914 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 USP22Q9UPT9 525 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 CORO2BQ9UQ03 480 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 PCDHGA8Q9Y5G5 932 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 IGHV1OR15-9A0A0B4J2B8 117 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 TSPAN11A1L157 253 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 H7BY64 318 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
HDAC6-201ENST00000334136 SLC16A8O95907 504 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 MATN1P21941 496 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 HTR1EP28566 365 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 OR1E2P47887 323 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 AKR1D1P51857 326 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 GPAT3Q53EU6 434 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 ANXA8L1Q5VT79 327 aa11.26□□□□□ -0.61
HDAC6-201ENST00000334136 ANKRD26P1Q6NSI1 321 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms