RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 DEPDC4Q8N2C3 294 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 HCAR2Q8TDS4 363 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TFGQ92734 400 aaPredicted RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 EXOSC8Q96B26 276 aaKnown RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 SERHL2Q9H4I8 314 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TEX10Q9NXF1 929 aaPredicted RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 CLEC2DQ9UHP7 191 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 ZNF229Q9UJW7 825 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TMPRSS11DO60235 418 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ENTPD6O75354 484 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 CKMT1AP12532 417 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 DDCP20711 480 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ITGB7P26010 798 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 HTRA4P83105 476 aaPredicted RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 TSTQ16762 297 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 DEPDC1Q5TB30 811 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 TAGAPQ8N103 731 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 LINC00615Q96LM1 132 aaPredicted RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 MACROD1Q9BQ69 325 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 DPEP2Q9H4A9 486 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 SIRT3Q9NTG7 399 aaPredicted RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 REV1Q9UBZ9 1251 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ICKQ9UPZ9 632 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 TPST2O60704 377 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 PRKRAO75569 313 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 MFN2O95140 757 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 GJA8P48165 433 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 CDC42P60953 191 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ELOAQ14241 798 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 SSX1Q16384 188 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 HNRNPA1L2Q32P51 320 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 KHDRBS2Q5VWX1 349 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 C6orf120Q7Z4R8 191 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ATCAYQ86WG3 371 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 PARP16Q8N5Y8 322 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 C12orf76Q8N812 135 aaPredicted RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 OR5D16Q8NGK9 328 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 RAD51AP1Q96B01 352 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 MGLLQ99685 303 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 PSD2Q9BQI7 771 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 TMEM221A6NGB7 291 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 HMGN4O00479 90 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 STK25O00506 426 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 LATO43561 262 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 KIAA0513O60268 411 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 LCMT2O60294 686 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 IFNA14P01570 189 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 CD72P21854 359 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 CTNNB1P35222 781 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 RPL3P39023 403 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 SAXO2Q658L1 398 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 UNC5DQ6UXZ4 953 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 DEF8Q6ZN54 512 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 ETFBKMTQ8IXQ9 262 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 OTUB2Q96DC9 234 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 NEURL3Q96EH8 262 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 DNAJC27Q9NZQ0 273 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 MRPS23Q9Y3D9 190 aaKnown RBP12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
TUBA1B-201ENST00000332858 C17orf113A0A1B0GUU1 675 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 HEPACAM2A8MVW5 462 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 CTDSP2O14595 271 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 SYPL1Q16563 259 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 GAB4Q2WGN9 574 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 LCTLQ6UWM7 567 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 WDR36Q8NI36 951 aaKnown RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 SETD7Q8WTS6 366 aaKnown RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 MS4A8Q9BY19 250 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 NXF2Q9GZY0 626 aaKnown RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 MVB12BQ9H7P6 319 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 SNRNP200O75643 2136 aaKnown RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 DSPPQ9NZW4 1301 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 C5orf58C9J3I9 102 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 RFXAPO00287 272 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 KCNK2O95069 426 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 ELAVL4P26378 380 aaKnown RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 SOX3P41225 446 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 DPTQ07507 201 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 PIN1Q13526 163 aaPredicted RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 ZNF234Q14588 700 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 SZRD1Q7Z422 152 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 UBE3DQ7Z6J8 389 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 PDZD3Q86UT5 571 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 C17orf64Q86WR6 236 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 HEATR4Q86WZ0 1026 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 POC5Q8NA72 575 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 ZNF707Q96C28 371 aaPredicted RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 MENTQ9BUN1 341 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 TMEM165Q9HC07 324 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 GIN1Q9NXP7 522 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 SPATA7Q9P0W8 599 aa12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 PAIP2BQ9ULR5 123 aaKnown RBP12.74□□□□□ -0.37
TUBA1B-201ENST00000332858 GPR34Q9UPC5 381 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms