RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 ARRDC5A6NEK1 342 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 H0YIV9 168 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 EOMESO95936 686 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 ZNF33BQ06732 778 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 HEPACAMQ14CZ8 416 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 SPIN4Q56A73 249 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 LRRC73Q5JTD7 316 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 TMC8Q8IU68 726 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 DCAF4L2Q8NA75 395 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 LINC01599Q8WXQ3 324 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 TTC9Q92623 222 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 KATNB1Q9BVA0 655 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 BRF2Q9HAW0 419 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
SNX20-202ENST00000330943 SATB2Q9UPW6 733 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 PLXNB3Q9ULL4 1909 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 SAP18O00422 153 aaKnown RBP13.76□□□□□ -0.21
SNX20-202ENST00000330943 APOL3O95236 402 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 ETV5P41161 510 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 ETV1P50549 477 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 PUM1Q14671 1186 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNX20-202ENST00000330943 WSCD2Q2TBF2 565 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 RPS26P11Q5JNZ5 115 aaPredicted RBP13.76□□□□□ -0.21
SNX20-202ENST00000330943 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNX20-202ENST00000330943 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 OR52P1PQ8NH57 321 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 ZBED6CLQ96FA7 236 aaPredicted RBP13.76□□□□□ -0.21
SNX20-202ENST00000330943 SAMD11Q96NU1 681 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 DHRS9Q9BPW9 319 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 HDHD5Q9BXW7 423 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 TVP23BQ9NYZ1 205 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 PCDHB7Q9Y5E2 793 aa13.76□□□□□ -0.21
SNX20-202ENST00000330943 ADAM12O43184 909 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TSC22D2O75157 780 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 ARAFP10398 606 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 HSD3B1P14060 373 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TNNI3P19429 210 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 HSD3B2P26439 372 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 PCBP3P57721 371 aaKnown RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 RPS25P62851 125 aaKnown RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 FKBP1BP68106 108 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 CYP4F8P98187 520 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 ZNF763Q0D2J5 394 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TARDBPQ13148 414 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNX20-202ENST00000330943 ILKQ13418 452 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 P2RY14Q15391 338 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 FLYWCH1Q4VC44 716 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 RETSATQ6NUM9 610 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 MZT2BQ6NZ67 158 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 ZNF767PQ75MW2 155 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 AMIGO1Q86WK6 493 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 OR8J1Q8NGP2 316 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 GOT1L1Q8NHS2 421 aaPredicted RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 KIAA1143Q96AT1 154 aaPredicted RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 UPRTQ96BW1 309 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 ALG14Q96F25 216 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 OR4K3Q96R72 315 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 RBFOX1Q9NWB1 397 aaKnown RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 HELZP42694 1942 aaKnown RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 KPNA5O15131 536 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 SLC16A5O15375 505 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TLX2O43763 284 aaPredicted RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 SOCS5O75159 536 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 RPLP2P05387 115 aaKnown RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 ATP1B2P14415 290 aaPredicted RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 SERPINA4P29622 427 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 MPEG1Q2M385 716 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 CCSMST1Q4G0I0 132 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 CRTC2Q53ET0 693 aaPredicted RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 ZNF628Q5EBL2 1059 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 PLEKHS1Q5SXH7 462 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 C12orf73Q69YU5 71 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 LAMTOR1Q6IAA8 161 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 AGTRAPQ6RW13 159 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 OR52I1Q8NGK6 324 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 PPCDCQ96CD2 204 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TM9SF2Q99805 663 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 C19orf43Q9BQ61 176 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 POLR2J3Q9H1A7 115 aaKnown RBP13.75□□□□□ -0.21
SNX20-202ENST00000330943 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 MAT2BQ9NZL9 334 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 TRPM5Q9NZQ8 1165 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 ATP6V1HQ9UI12 483 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 KCND3Q9UK17 655 aa13.75□□□□□ -0.21
SNX20-202ENST00000330943 IGLV3-16A0A075B6K0 115 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 TRIM3O75382 744 aaPredicted RBP13.74□□□□□ -0.21
SNX20-202ENST00000330943 PRKAR1AP10644 381 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 CYBAP13498 195 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 CPEP16870 476 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 RPL17P18621 184 aaKnown RBP13.74□□□□□ -0.21
SNX20-202ENST00000330943 LHCGRP22888 699 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 RAB25P57735 213 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 PTSQ03393 145 aa13.74□□□□□ -0.21
SNX20-202ENST00000330943 DCST1Q5T197 706 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms