RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 ANGPTL4Q9BY76 406 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 SH2D2AQ9NP31 389 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 FAM114A2Q9NRY5 505 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 IARS2Q9NSE4 1012 aaKnown RBP13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 KLHL42Q9P2K6 505 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 URI1O94763 535 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 PIGAP37287 484 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 GPR143P51810 404 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 OLR1P78380 273 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 CAV1Q03135 178 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 TAP2Q03519 686 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 DUSP8Q13202 625 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 CTBP1Q13363 440 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 HERC3Q15034 1050 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 LRRC25Q8N386 305 aaPredicted RBP13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 PPFIBP2Q8ND30 876 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 KCNJ9Q92806 393 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 THAP11Q96EK4 314 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 CFAP36Q96G28 342 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 CALHM2Q9HA72 323 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 ZFP64Q9NPA5 681 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 ABCF3Q9NUQ8 709 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 WHRNQ9P202 907 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 CAMK2AQ9UQM7 478 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 SNX24Q9Y343 169 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 WIF1Q9Y5W5 379 aa13.52□□□□□ -0.25
CTHRC1-201ENST00000330295 A8MXE2 369 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 NIPSNAP2O75323 286 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 ENO3P13929 434 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 ACVR1BP36896 505 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 ELK3P41970 407 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 SKIV2L2P42285 1042 aaKnown RBP13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC1A2P43004 574 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 PNLIPRP1P54315 467 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 ILF2Q12905 390 aaKnown RBP13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 FAM174BQ3ZCQ3 159 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 HECTD2Q5U5R9 776 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 LRRC8EQ6NSJ5 796 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 ASPGQ86U10 573 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 DENND6AQ8IWF6 608 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 CERS2Q96G23 380 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 LCORQ96JN0 433 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 PIGMQ9H3S5 423 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 FBXO6Q9NRD1 293 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 BOKQ9UMX3 212 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
CTHRC1-201ENST00000330295 MED12Q93074 2177 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 LRRC3CA6NJW4 275 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF839A8K0R7 811 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 MYO1CO00159 1063 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 GALR3O60755 368 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 HSD17B2P37059 387 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 RGS4P49798 205 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 DIO3P55073 304 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 C2orf54Q08AI8 447 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 FAM27E3Q08E93 113 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 PDIA2Q13087 525 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 DNM1P46Q6ZS02 220 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 PALM2Q8IXS6 379 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 C2CD4AQ8NCU7 369 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC13A3Q8WWT9 602 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 SREK1Q8WXA9 508 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 FAM136AQ96C01 138 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 TRMT61AQ96FX7 289 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 SLCO5A1Q9H2Y9 848 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 ESRP2Q9H6T0 727 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 PNO1Q9NRX1 252 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 TMEM184CQ9NVA4 438 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 TAS2R13Q9NYV9 303 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 TRMT6Q9UJA5 497 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-201ENST00000330295 YLPM1P49750 1951 aaKnown RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 PABPN1LA6NDY0 278 aaKnown RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 E7ENX8 843 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 EIF3FO00303 357 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 ADAM11O75078 769 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 HAUS5O94927 633 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 MATN4O95460 622 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC35G6P0C7Q6 338 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 PCYT1AP49585 367 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 HK2P52789 917 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 MTTPP55157 894 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms