RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CXCL11O14625 94 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 FFAR1O14842 300 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 PSIP1O75475 530 aaKnown RBP12.18□□□□□ -0.46
CCDC60-201ENST00000327554 ADAP00813 363 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 RHCEP18577 417 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 SLC6A4P31645 630 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 EPHA5P54756 1037 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 OCLNQ16625 522 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 C10orf120Q5SQS8 335 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 GARNL3Q5VVW2 1013 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 BICRALQ6AI39 1079 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 ANGPTL8Q6UXH0 198 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 DENND1CQ8IV53 801 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 OR4A15Q8NGL6 344 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 OR8J1Q8NGP2 316 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 C11orf24Q96F05 449 aaPredicted RBP12.18□□□□□ -0.46
CCDC60-201ENST00000327554 KLHL15Q96M94 604 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 ZNF578Q96N58 590 aaPredicted RBP12.18□□□□□ -0.46
CCDC60-201ENST00000327554 GHITMQ9H3K2 345 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 ASB8Q9H765 288 aa12.18□□□□□ -0.46
CCDC60-201ENST00000327554 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
CCDC60-201ENST00000327554 RUVBL1Q9Y265 456 aaKnown RBP12.18□□□□□ -0.46
CCDC60-201ENST00000327554 F5H5T6 163 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 H3BNC9 293 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 TOR1AO14656 332 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 PPM1BO75688 479 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 RAB36O95755 333 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 IDSP22304 550 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 FGF9P31371 208 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 GRK4P32298 578 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 NNMTP40261 264 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 GSTM5P46439 218 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 INPP1P49441 399 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 DBPQ10586 325 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 RPA4Q13156 261 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 TPBGQ13641 420 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 SNAPC1Q16533 368 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CRB2Q5IJ48 1285 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CDKL4Q5MAI5 379 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 BCL2L15Q5TBC7 163 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 MFSD14CQ5VZR4 134 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 MACC1Q6ZN28 852 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CAMKMTQ7Z624 323 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 TAGAPQ8N103 731 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 WBP1Q96G27 269 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 SCMH1Q96GD3 660 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 RBP7Q96R05 134 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 PTTG3PQ9NZH4 202 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 VPS29Q9UBQ0 182 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 ZNF282Q9UDV7 671 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 AFF4Q9UHB7 1163 aaKnown RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 ST3GAL5Q9UNP4 418 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 PCDHB7Q9Y5E2 793 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 TRBC2A0A5B9 178 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 H3BUI4 141 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 SLC30A4O14863 429 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CASKO14936 926 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 NCR1O76036 304 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 IFNA7P01567 189 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 ALPIP09923 528 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CD22P20273 847 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 ACRV1P26436 265 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 WNT4P56705 351 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 WDR5P61964 334 aaKnown RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 RAE1P78406 368 aaKnown RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 NFATC2Q13469 925 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 HEPACAMQ14CZ8 416 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 SEC23BQ15437 767 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 LGALSLQ3ZCW2 172 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 KLHL12Q53G59 568 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CD200R1LQ6Q8B3 271 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 CASP12Q6UXS9 341 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 HJURPQ8NCD3 748 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 RBPMSQ93062 196 aaKnown RBP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC60-201ENST00000327554 SYNDIG1Q9H7V2 258 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 KCMF1Q9P0J7 381 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 ZNF222Q9UK12 451 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 FKBP7Q9Y680 259 aa12.17□□□□□ -0.46
CCDC60-201ENST00000327554 TRBV5-4A0A0C4DH59 114 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 NDUFA2O43678 99 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 SERPINI2O75830 405 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PAHP00439 452 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 ANXA3P12429 323 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 JUPP14923 745 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 HLA-FP30511 346 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 OPRD1P41143 372 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 PSEN2P49810 448 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 XKP51811 444 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 MAP2K6P52564 334 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 GAS1P54826 345 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 LIM2P55344 173 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 UBE3AQ05086 875 aa12.16□□□□□ -0.46
CCDC60-201ENST00000327554 NDUFAF5Q5TEU4 345 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms