RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SLC35C2Q9NQQ7 365 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 ACSL6Q9UKU0 697 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 PCDHB14Q9Y5E9 798 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 PCDHGA7Q9Y5G6 932 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 PRSS51A0A1B0GVH4 220 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 DCDC2BA2VCK2 349 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 CSRP1P21291 193 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PPP2R1BP30154 601 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 MSX2P35548 267 aaPredicted RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 SOX11P35716 441 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 ARSFP54793 590 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 EMP3P54852 163 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PCBP4P57723 403 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 GAB1Q13480 694 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 IL11RAQ14626 422 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 LTB4RQ15722 352 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 C10orf111Q8N326 155 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 SIMC1Q8NDZ2 872 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 ADCY4Q8NFM4 1077 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 UTP4Q969X6 686 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PPWD1Q96BP3 646 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 ULBP3Q9BZM4 244 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 TRIM4Q9C037 500 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 BHLHE41Q9C0J9 482 aaPredicted RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 STRADBQ9C0K7 418 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PAIP1Q9H074 479 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 GLIPR2Q9H4G4 154 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 FBXO8Q9NRD0 319 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■□□□□ 10.6
PRPF3-201ENST00000324862 A0A1W2PRB8 838 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 BBIP1A8MTZ0 92 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 RFXANKO14593 260 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PDPK1O15530 556 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 GUCY1B2O75343 617 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 JMJD7P0C870 316 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 RNH1P13489 461 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 MTPNP58546 118 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 DPY19L1Q2PZI1 675 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 ZNF385CQ66K41 422 aaPredicted RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 FAM156AQ8NDB6 213 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PNPT1Q8TCS8 783 aaKnown RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 TSPEARQ8WU66 669 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 ANKRD9Q96BM1 317 aaPredicted RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 ZNF681Q96N22 645 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 DEPDC7Q96QD5 511 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 TUBB6Q9BUF5 446 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 NPLQ9BXD5 320 aaPredicted RBP14.37□□□□□ -0.11
PRPF3-201ENST00000324862 LRMDAQ9H2I8 198 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 TMEM45AQ9NWC5 275 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 CLDN16Q9Y5I7 305 aa14.37□□□□□ -0.11
PRPF3-201ENST00000324862 PLD2O14939 933 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 PDE5AO76074 875 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 KRT16P08779 473 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 FBLP22087 321 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 XKP51811 444 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MRPS35P82673 323 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 DSG2Q14126 1118 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MINDY4Q4G0A6 757 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 DGAT2L6Q6ZPD8 337 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 ZNF621Q6ZSS3 439 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 DPP10Q8N608 796 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 OR4A15Q8NGL6 344 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 TBC1D20Q96BZ9 403 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MTERF3Q96E29 417 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 LIN37Q96GY3 246 aaPredicted RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 THTPAQ9BU02 230 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 PIF1Q9H611 641 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 ATAD3AQ9NVI7 634 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 FAM120CQ9NX05 1096 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MS4A12Q9NXJ0 267 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 FOXJ2Q9P0K8 574 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 SRPK3Q9UPE1 567 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 USP22Q9UPT9 525 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 WBP11Q9Y2W2 641 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MAP4K5Q9Y4K4 846 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 PCDHB3Q9Y5E6 796 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 C9orf172C9J069 976 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MEN1O00255 615 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 RNASET2O00584 256 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 GSC2O15499 205 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 CEACAM1P13688 526 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 RORAP35398 523 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MNAT1P51948 309 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MANFP55145 182 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 PSME3P61289 254 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 ABHD18Q0P651 414 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 SLC13A2Q13183 592 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 TRMT5Q32P41 509 aaKnown RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 NKAIN1Q4KMZ8 207 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MFSD4BQ5TF39 518 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 C8orf82Q6P1X6 216 aaPredicted RBP14.36□□□□□ -0.11
PRPF3-201ENST00000324862 PCYOX1LQ8NBM8 494 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 OR9A2Q8NGT5 310 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 STARD8Q92502 1023 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MVB12AQ96EY5 273 aa14.36□□□□□ -0.11
PRPF3-201ENST00000324862 MAGED4Q96JG8 741 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms