RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ZDHHC6Q9H6R6 413 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CNOT2Q9NZN8 540 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 EVLQ9UI08 416 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 PCDHGA8Q9Y5G5 932 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ARHGAP32A7KAX9 2087 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 C2orf92A0A1B0GVN3 265 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 TRBC2A0A5B9 178 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CD8B2A6NJW9 211 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NUDT14O95848 222 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 C1QBP02746 253 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ALPPP05187 535 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CD8BP10966 210 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 JUPP14923 745 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 BCL7AQ4VC05 210 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SIRPB2Q5JXA9 342 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 OR56B4Q8NH76 319 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC15Q8TF66 581 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 TMEM125Q96AQ2 219 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SECISBP2Q96T21 854 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 H3BUI4 141 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 TYRP14679 529 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GABRA5P31644 462 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 C6orf136Q5SQH8 315 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GRHL2Q6ISB3 625 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NPAS3Q8IXF0 933 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GTPBP8Q8N3Z3 284 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF557Q8N988 423 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 XAGE5Q8WWM1 108 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 HMCESQ96FZ2 354 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GPER1Q99527 375 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SULT4A1Q9BR01 284 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 BEX1Q9HBH7 125 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 INSIG1O15503 277 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CTSHP09668 335 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ATP5C1P36542 298 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 STC1P52823 247 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 EMP3P54852 163 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 COTL1Q14019 142 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ABHD15Q6UXT9 468 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 TMEM135Q86UB9 458 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 C17orf64Q86WR6 236 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 GALNT13Q8IUC8 556 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 KRTCAP2Q8N6L1 136 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 OR2T11Q8NH01 316 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 FRS2Q8WU20 508 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 DNASE1L2Q92874 299 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 FCRL1Q96LA6 429 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 AP1S3Q96PC3 154 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MRI1Q9BV20 369 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RBM38Q9H0Z9 239 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 OR6C2Q9NZP2 312 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ABCD2Q9UBJ2 740 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MRPL42Q9Y6G3 142 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 C13orf42A0A1B0GVH6 325 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 URADA6NGE7 173 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CST3P01034 146 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CAPNS1P04632 268 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ADRB1P08588 477 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 LAMP2P13473 410 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ZP3P21754 424 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 HLA-DMAP28067 261 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CCND3P30281 292 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MAP3K8P41279 467 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 AVPR1BP47901 424 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 KCNQ1P51787 676 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 FCGRTP55899 365 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 PFKPQ01813 784 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 ASAH1Q13510 395 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 PAQR3Q6TCH7 311 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 FAM217AQ8IXS0 508 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 C1orf127Q8N9H9 656 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CMTM7Q96FZ5 175 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 BTBD2Q9BX70 525 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 REEP4Q9H6H4 257 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 GBA2Q9HCG7 927 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RPS10P5Q9NQ39 176 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 GABARAPO95166 117 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 AGR2O95994 175 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 GTF2F2P13984 249 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CELP19835 753 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 LAX1Q8IWV1 398 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 TMEM102Q8N9M5 508 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CHST4Q8NCG5 386 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 GIMAP1Q8WWP7 306 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RERGQ96A58 199 aaPredicted RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 UROC1Q96N76 676 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CLCC1Q96S66 551 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 CYP2S1Q96SQ9 504 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 RIOK2Q9BVS4 552 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
SMC1A-201ENST00000322213 OR51E2Q9H255 320 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 TPT1P8Q9HAU6 139 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 MYNNQ9NPC7 610 aa6.78□□□□□ -1.32
SMC1A-201ENST00000322213 KANSL3Q9P2N6 904 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms