RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MUC6Q6W4X9 2439 aa12.44□□□□□ -0.42
CPNE1-201ENST00000317677 CLDN24A6NM45 220 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 TPST1O60507 370 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 NPPAP01160 153 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 PSMB5P28074 263 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 PTPN6P29350 595 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ETV6P41212 452 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 EEFSECP57772 596 aaKnown RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 OR4D2P58180 307 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 TDGQ13569 410 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 GPR50Q13585 617 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CYP51A1Q16850 503 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 UGT8Q16880 541 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 Q5BKY6 102 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 MED27Q6P2C8 311 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 XKRXQ6PP77 449 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 LCTLQ6UWM7 567 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CELF2-AS1Q8N7Q2 184 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 LINC01555Q8NAE3 123 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CHTF18Q8WVB6 975 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 FAM3CQ92520 227 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 BMFQ96LC9 184 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ZBTB18Q99592 522 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 C17orf62Q9BQA9 187 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 TRAF4Q9BUZ4 470 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ACAT2Q9BWD1 397 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ALG2Q9H553 416 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 BRF2Q9HAW0 419 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF304Q9HCX3 659 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 FAM118AQ9NWS6 357 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 TRIOO75962 3097 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 METTL15A6NJ78 407 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 AXIN1O15169 862 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 KLHL18O94889 574 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 TBX6O95947 436 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 C1QCP02747 245 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 IL6P05231 212 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 SLC35G4P0C7Q5 338 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 MTHFD1P11586 935 aaKnown RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 HSD3B1P14060 373 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 NCK1P16333 377 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CFL1P23528 166 aaKnown RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 HRH2P25021 359 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 HSD3B2P26439 372 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 SOX11P35716 441 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 RPS5P46782 204 aaKnown RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 VBP1P61758 197 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 EOGTQ5NDL2 527 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 LAIR2Q6ISS4 152 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 IFNEQ86WN2 208 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 FAM129CQ86XR2 697 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 GATAD2AQ86YP4 633 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 C10orf111Q8N326 155 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 C1orf52Q8N6N3 182 aaKnown RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 PJA1Q8NG27 643 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 SETD6Q8TBK2 473 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 OR1E3Q8WZA6 343 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 PDXPQ96GD0 296 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 C12orf66Q96MD2 445 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CITED4Q96RK1 184 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 INPP5KQ9BT40 448 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 OSGEPL1Q9H4B0 414 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 PIF1Q9H611 641 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 DMRT3Q9NQL9 472 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 CUEDC1Q9NWM3 386 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ATPIF1Q9UII2 106 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 ACSL5Q9ULC5 683 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 BTBD3Q9Y2F9 522 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
CPNE1-201ENST00000317677 SNRNP200O75643 2136 aaKnown RBP12.42□□□□□ -0.42
CPNE1-201ENST00000317677 CTDSP2O14595 271 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 YY2O15391 372 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 PI15O43692 258 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 NOS1APO75052 506 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-201ENST00000317677 PRKD3O94806 890 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 EML2O95834 649 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 ITGA2P17301 1181 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 RYKP34925 604 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 CDKN2CP42773 168 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 WNT3P56703 355 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 IL18R1Q13478 541 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 MAPKAPK3Q16644 382 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 TRIM69Q86WT6 500 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 PLCZ1Q86YW0 608 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 FAM83FQ8NEG4 500 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-201ENST00000317677 FLCNQ8NFG4 579 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 SETD7Q8WTS6 366 aaKnown RBP12.42□□□□□ -0.42
CPNE1-201ENST00000317677 TESCQ96BS2 214 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 OMA1Q96E52 524 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 TMEM80Q96HE8 168 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 REXO5Q96IC2 774 aaKnown RBP12.42□□□□□ -0.42
CPNE1-201ENST00000317677 OR52E6Q96RD3 313 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 EFCAB11Q9BUY7 163 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 NTN4Q9HB63 628 aa12.42□□□□□ -0.42
CPNE1-201ENST00000317677 PLSCR3Q9NRY6 295 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms