RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PTGR2Q8N8N7 351 aaPredicted RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 PHF21BQ96EK2 531 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 SENP5Q96HI0 755 aaPredicted RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 PAFAH2Q99487 392 aa16.48■□□□□ 0.23
TPM1-203ENST00000317516 PELOQ9BRX2 385 aaKnown RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 SORBS1Q9BX66 1292 aaKnown RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 NOL11Q9H8H0 719 aaKnown RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 RYDENQ9NUL5 291 aaKnown RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.23
TPM1-203ENST00000317516 LYARQ9NX58 379 aaKnown RBP16.48■□□□□ 0.23
TPM1-203ENST00000317516 LRRC14BA6NHZ5 514 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 E9PLN8 166 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 STX16-NPEPL1H3BU86 382 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 KIF2AO00139 706 aaPredicted RBP16.47■□□□□ 0.23
TPM1-203ENST00000317516 ACOT7O00154 380 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 STX16O14662 325 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 PROM1O43490 865 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 HS6ST1O60243 411 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 CDC40O60508 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPM1-203ENST00000317516 OR6B1O95007 311 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 SIX3O95343 332 aaPredicted RBP16.47■□□□□ 0.23
TPM1-203ENST00000317516 ETHE1O95571 254 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 RFC3P40938 356 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 SOX3P41225 446 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 CCNG1P51959 295 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 HSF1Q00613 529 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 TNFRSF17Q02223 184 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 PLGLB1Q02325 96 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 FOLH1Q04609 750 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 ZNF630Q2M218 657 aaPredicted RBP16.47■□□□□ 0.23
TPM1-203ENST00000317516 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 RTL4Q6ZR62 310 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 DOLPP1Q86YN1 238 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 PLD6Q8N2A8 252 aaKnown RBP16.47■□□□□ 0.23
TPM1-203ENST00000317516 RNF175Q8N4F7 328 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 GOLM1Q8NBJ4 401 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 NOA1Q8NC60 698 aaKnown RBP16.47■□□□□ 0.23
TPM1-203ENST00000317516 ZNF721Q8TF20 911 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 AGAP11Q8TF27 550 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 ISL2Q96A47 359 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 SERPINI1Q99574 410 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 VKORC1Q9BQB6 163 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 DDX31Q9H8H2 851 aaKnown RBP16.47■□□□□ 0.23
TPM1-203ENST00000317516 AHSPQ9NZD4 102 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 ZNF180Q9UJW8 692 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 PPT2Q9UMR5 302 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 RNF11Q9Y3C5 154 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 ATG4BQ9Y4P1 393 aa16.47■□□□□ 0.23
TPM1-203ENST00000317516 A0A087WUV0 522 aaPredicted RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 POC1B-GALNT4F8VUJ3 575 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 OR10H2O60403 315 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 GPR75O95800 540 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 FAM58BPP0C7Q3 252 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 ALOX15P16050 662 aaPredicted RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 CNR1P21554 472 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 PTGER1P34995 402 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 MAGEA12P43365 314 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 ADORA2A-AS1P86434 159 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 C18orf63Q68DL7 685 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 TTC19Q6DKK2 380 aaPredicted RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 ARHGAP11AQ6P4F7 1023 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 GK5Q6ZS86 529 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 NUDT13Q86X67 352 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 TICAM1Q8IUC6 712 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 ZNF321PQ8N8H1 164 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 NUBPLQ8TB37 319 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 WDR20Q8TBZ3 569 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 PHF10Q8WUB8 498 aaKnown RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 MRPL57Q9BQC6 102 aaKnown RBP16.46■□□□□ 0.23
TPM1-203ENST00000317516 NTMT1Q9BV86 223 aa16.46■□□□□ 0.23
TPM1-203ENST00000317516 CROCCQ5TZA2 2017 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 A0A0A6YYD5 115 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 IQANK1A0A1B0GTG1 560 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 SEMA3DO95025 777 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 P04436 131 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 TPOP07202 933 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 SNRPAP09012 282 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 NR2F6P10588 404 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 BSGP35613 385 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 NEK2P51955 445 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 HNRNPH2P55795 449 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 PPIAP62937 165 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 TBL3Q12788 808 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 IFT88Q13099 833 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 ZNF750Q32MQ0 723 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 CMPK2Q5EBM0 449 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 PIGGQ5H8A4 983 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 NDUFAF5Q5TEU4 345 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 MRM1Q6IN84 353 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 SLC22A16Q86VW1 577 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 CHERPQ8IWX8 916 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 SLC15A4Q8N697 577 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 OR2M7Q8NG81 312 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 FAM57AQ8TBR7 257 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 SLC22A8Q8TCC7 542 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 SREK1Q8WXA9 508 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 FBXL20Q96IG2 436 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms