RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 IDUAP35475 653 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 FCGRTP55899 365 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ADARB1P78563 741 aaKnown RBP4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ARHGAP1Q07960 439 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 RASGEF1BQ0VAM2 473 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ST3GAL3Q11203 375 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 MTAPQ13126 283 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 CBFBQ13951 182 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 TSTQ16762 297 aaKnown RBP4.34□□□□□ -1.71
CNOT1-201ENST00000317147 SLC35G1Q2M3R5 365 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 UBE2NLQ5JXB2 153 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF678Q5SXM1 525 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 COL13A1Q5TAT6 717 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-201ENST00000317147 PRAMEF17Q5VTA0 474 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 B3GNTL1Q67FW5 361 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ENPP7Q6UWV6 458 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 RPTNQ6XPR3 784 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 OOSP2Q86WS3 158 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 AVL9Q8NBF6 648 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 RAD51AP1Q96B01 352 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 RGCCQ9H4X1 137 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ANKRD19PQ9H560 264 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 ABCB9Q9NP78 766 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 C1GALT1Q9NS00 363 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 FBXL4Q9UKA2 621 aa4.34□□□□□ -1.71
CNOT1-201ENST00000317147 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
CNOT1-201ENST00000317147 RPH3AQ9Y2J0 694 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-201ENST00000317147 IGLV3-22A0A075B6J6 115 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 C17orf113A0A1B0GUU1 675 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 DAPL1A0PJW8 107 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF780AO75290 641 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 GJA1P17302 382 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 NFYAP23511 347 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 GADD45AP24522 165 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 HRH2P25021 359 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ASPAP45381 313 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PRKXP51817 358 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 VSX2P58304 361 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PEA15Q15121 130 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 XKR4Q5GH76 650 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 C6orf136Q5SQH8 315 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PRAMEF8Q5VWM4 474 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PRAMEF7Q5VXH5 474 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 LIPJQ5W064 366 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 RHOUQ7L0Q8 258 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 KCTD20Q7Z5Y7 419 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 CERKQ8TCT0 537 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 C1orf74Q96LT6 269 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PTCHD1Q96NR3 888 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 NELL2Q99435 816 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 COLEC11Q9BWP8 271 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 SLC19A3Q9BZV2 496 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ARL6Q9H0F7 186 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.34□□□□□ -1.728e-8■■■□□ 16.6
CNOT1-201ENST00000317147 AGO3Q9H9G7 860 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 DDX4Q9NQI0 724 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 HACL1Q9UJ83 578 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PNMA8BQ9ULN7 279 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 MAFFQ9ULX9 164 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 NCF1BA6NI72 391 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 HSPB2A8KAH6 182 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 NCF1CA8MVU1 366 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 KIAA0355O15063 1070 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 FGF19O95750 216 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 FUCA1P04066 466 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 STSP08842 583 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ARL2P36404 184 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 KCNJ5P48544 419 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 MLLT6P55198 1093 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 TAS2R39P59534 338 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PSMA6P60900 246 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 NRG1Q02297 640 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 SNTB2Q13425 540 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 RBMS2Q15434 407 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 HSPB2Q16082 182 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 LRRC26Q2I0M4 334 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 C10orf120Q5SQS8 335 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 STEAP3Q658P3 488 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 DNM1P34Q6PK57 102 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 SLC22A25Q6T423 547 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ASB18Q6ZVZ8 466 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 NDUFAF7Q7L592 441 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 CLEC14AQ86T13 490 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 C12orf29Q8N999 325 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 SLC2A12Q8TD20 617 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ZFP90Q8TF47 636 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 SLC25A46Q96AG3 418 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 SGK3Q96BR1 496 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF778Q96MU6 729 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM74Q96NL1 305 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 DCLRE1CQ96SD1 692 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 MINDY3Q9H8M7 445 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PADI2Q9Y2J8 665 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 COL5A3P25940 1745 aaPredicted RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 COL24A1Q17RW2 1714 aa4.34□□□□□ -1.72
CNOT1-201ENST00000317147 PRRC2AP48634 2157 aaKnown RBP4.34□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF831Q5JPB2 1677 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 NRCAMQ92823 1304 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TCRBV7S3A2A0A539 114 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms