RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 FAM98BQ52LJ0 330 aaKnown RBP6.36□□□□□ -1.39
ZNF540-201ENST00000316433 PYDC2Q56P42 97 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 LRIF1Q5T3J3 769 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 BICRALQ6AI39 1079 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 ESRP1Q6NXG1 681 aaKnown RBP6.36□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF783Q6ZMS7 281 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 MOB2Q70IA6 237 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 ISCA2Q86U28 154 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 TAC4Q86UU9 113 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 RNF113BQ8IZP6 322 aaKnown RBP6.36□□□□□ -1.39
ZNF540-201ENST00000316433 C19orf18Q8NEA5 215 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 OR11H7Q8NGC8 314 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 POC1BQ8TC44 478 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 POF1BQ8WVV4 589 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 LRRC58Q96CX6 371 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 ERMAPQ96PL5 475 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-201ENST00000316433 FAM83CQ9BQN1 747 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 H2AFJQ9BTM1 129 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 LRRC3Q9BY71 257 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 ABCG8Q9H221 673 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 MIXL1Q9H2W2 232 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 POMKQ9H5K3 350 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF408Q9H9D4 720 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 GPATCH2LQ9NWQ4 482 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 MIOSQ9NXC5 875 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 TAS2R13Q9NYV9 303 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 MED11Q9P086 117 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 DNAJB9Q9UBS3 223 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 SSUH2Q9Y2M2 353 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 KLK4Q9Y5K2 254 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 BACE2Q9Y5Z0 518 aa6.36□□□□□ -1.39
ZNF540-201ENST00000316433 A0A087WZ62 844 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 A0A0J9YYE9 177 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SMIM28A0A1B0GU29 152 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 METTL21EPA6NDL7 271 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 FABP12A6NFH5 140 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 POM121CA8CG34 1229 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 FAM220BPB1ANY3 271 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF197O14709 1029 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SIGLEC5O15389 551 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 LYRM1O43325 122 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CRTAPO75718 401 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GUCA1CO95843 209 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 S1PR4O95977 384 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MOCS2O96007 188 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CRYBA1P05813 215 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TSPAN19P0C672 248 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 UROSP10746 265 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RHOQP17081 205 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GGT1P19440 569 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 DNASE1P24855 282 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RGS6P49758 472 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 BEX3Q00994 111 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MC2RQ01718 297 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CHRNB3Q05901 458 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SIGLEC14Q08ET2 396 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CDH18Q13634 790 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GBX1Q14549 363 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TTLL9Q3SXZ7 439 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GGTA1PQ4G0N0 100 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 HECTD3Q5T447 861 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TRIQKQ629K1 86 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RAET1GQ6H3X3 334 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TCEAL6Q6IPX3 200 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CAPN13Q6MZZ7 669 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TMEM88Q6PEY1 159 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CLEC2AQ6UVW9 174 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ACOT1Q86TX2 421 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CEP97Q8IW35 865 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ARRDC1Q8N5I2 433 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ATPAF2Q8N5M1 289 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 DCBLD1Q8N8Z6 715 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF511Q8NB15 262 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 LPCAT1Q8NF37 534 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 UCN3Q969E3 161 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CREB3L1Q96BA8 519 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 OTULINQ96BN8 352 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ZBED6CLQ96FA7 236 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RHOVQ96L33 236 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TMEM209Q96SK2 561 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 FDXACB1Q9BRP7 624 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 B3GNT5Q9BYG0 378 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TWSG1Q9GZX9 223 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 OPN3Q9H1Y3 402 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SLCO1C1Q9NYB5 712 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MARK1Q9P0L2 795 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 PPP4R1LQ9P1A2 415 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RBPJLQ9UBG7 517 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 PISDQ9UG56 409 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MICAL3Q7RTP6 2002 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ARRDC5A6NEK1 342 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 C5orf52A6NGY3 159 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 D6RAR5 112 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TEX46H3BTG2 121 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 I6L893 689 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GNGT2O14610 69 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TXNL1O43396 289 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SCELO95171 688 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 HLA-DQB1P01920 261 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms