RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 RIPOR3Q96MK2 946 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 ABCG8Q9H221 673 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 FBXO4Q9UKT5 387 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 SAMD4AQ9UPU9 718 aaKnown RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PCDHGB2Q9Y5G2 931 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 SNX11Q9Y5W9 270 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 SIRT4Q9Y6E7 314 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 VPS13CQ709C8 3753 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 A0A1W2PS29 197 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 NTN1O95631 604 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 SLC16A8O95907 504 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 TFF2Q03403 129 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF846Q147U1 533 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PLA2G2CQ5R387 149 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 ASPHD2Q6ICH7 369 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 NHLRC1Q6VVB1 395 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 MIB1Q86YT6 1006 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 TBC1D19Q8N5T2 526 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PAF1Q8N7H5 531 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 SLC38A5Q8WUX1 472 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 NEDD4LQ96PU5 975 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 OR52E6Q96RD3 313 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 CCM2Q9BSQ5 444 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 CINPQ9BW66 212 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 TEX101Q9BY14 249 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 CLEC2DQ9UHP7 191 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 SLC22A14Q9Y267 594 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PCDHB9Q9Y5E1 797 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 VIPP01282 170 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 GSTT2P0CG29 244 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 GSTT2BP0CG30 244 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 DGKAP23743 735 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 IGFBP5P24593 272 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 REEP5Q00765 189 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 GALK2Q01415 458 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 MAPKAPK3Q16644 382 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 RNF130Q86XS8 419 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 ZDHHC13Q8IUH4 622 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 SLC44A3Q8N4M1 653 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 CELF2-AS1Q8N7Q2 184 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 METTL6Q8TCB7 284 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 CTHRC1Q96CG8 243 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 DTD2Q96FN9 168 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 WDR12Q9GZL7 423 aaKnown RBP7.4□□□□□ -1.23
CNOT4-201ENST00000315544 RAD21L1Q9H4I0 556 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 TPT1P8Q9HAU6 139 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF275Q9NSD4 429 aaPredicted RBP7.4□□□□□ -1.23
CNOT4-201ENST00000315544 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 PILRAQ9UKJ1 303 aa7.4□□□□□ -1.23
CNOT4-201ENST00000315544 DIMT1Q9UNQ2 313 aaKnown RBP7.4□□□□□ -1.23
CNOT4-201ENST00000315544 LAMA5O15230 3695 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 RAD51BO15315 384 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SUV39H1O43463 412 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TMPRSS11DO60235 418 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 DOK2O60496 412 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 CSF3P09919 207 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 C21orf59P57076 290 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 LRRC23Q53EV4 343 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PLA1AQ53H76 456 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PRAMEF8Q5VWM4 474 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PRAMEF7Q5VXH5 474 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PLAG1Q6DJT9 500 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 ZNF425Q6IV72 752 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TMEM107Q6UX40 140 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 THOC6Q86W42 341 aaKnown RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 CSGALNACT1Q8TDX6 532 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 C16orf78Q8WTQ4 265 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PROX1Q92786 737 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SEPHS2Q99611 448 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 MS4A8Q9BY19 250 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PRDM7Q9NQW5 492 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 GPR83Q9NYM4 423 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SLC23A2Q9UGH3 650 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 CAB39Q9Y376 341 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 LOC400499M0QZD8 3231 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TPST1O60507 370 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 LDB3O75112 727 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 CXCL14O95715 111 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 DBTP11182 482 aaKnown RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SAT1P21673 171 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PIK3CGP48736 1102 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TGM4P49221 684 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 RPIAP49247 311 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SEC13P55735 322 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 IMPG1Q17R60 797 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 KIF19Q2TAC6 998 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 PIP5KL1Q5T9C9 394 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 NXNQ6DKJ4 435 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 WASH2PQ6VEQ5 465 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 DBX2Q6ZNG2 339 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 SLC9B2Q86UD5 537 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 TCTE3Q8IZS6 198 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 AFAP1L2Q8N4X5 818 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 HJURPQ8NCD3 748 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 KREMEN2Q8NCW0 462 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 FCGR1BQ92637 280 aa7.39□□□□□ -1.23
CNOT4-201ENST00000315544 KIAA1143Q96AT1 154 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-201ENST00000315544 GABRG3Q99928 467 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms