RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ARNTLO00327 626 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 CSF2RAP15509 400 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SYN1P17600 705 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 STOMP27105 288 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 IER5LQ5T953 404 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 METTL2BQ6P1Q9 378 aaKnown RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 ALKAL1Q6UXT8 129 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ARMC10Q8N2F6 343 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SLC15A4Q8N697 577 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 C16orf78Q8WTQ4 265 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 MZB1Q8WU39 189 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 DPH7Q9BTV6 452 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 NPLQ9BXD5 320 aaPredicted RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 CST11Q9H112 138 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 PCDHGB6Q9Y5F9 930 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 A0A1B0GVT2 93 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 FEZF1A0PJY2 475 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 FLRT2O43155 660 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SMAD6O43541 496 aaKnown RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 IFNA7P01567 189 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 HRH2P25021 359 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ADRA1AP35348 466 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 DHCR24Q15392 516 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 RGNQ15493 299 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 THEM6Q8WUY1 208 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 TMEM19Q96HH6 336 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 A0A1W2PP55 124 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 GRXCR1A8MXD5 290 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 TMEM189-UBE2V1I3L0A0 370 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SOCS7O14512 581 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ADAP00813 363 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 MRPL3P09001 348 aaKnown RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 DRD2P14416 443 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 TYRP1P17643 537 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 RPS21P63220 83 aaKnown RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 SCRN3Q0VDG4 424 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ASPGQ86U10 573 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 NAGSQ8N159 534 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 MFSD2AQ8NA29 543 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 RIT1Q92963 219 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 TTTY10Q9BZA0 68 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 DCAF13Q9NV06 445 aaKnown RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 HSPB11Q9Y547 144 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ENPP4Q9Y6X5 453 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 GNAO1P09471 354 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SDC1P18827 310 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 TNFRSF1BP20333 461 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 GABRB3P28472 473 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 GCGRP47871 477 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 BMXP51813 675 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 CDK5R2Q13319 367 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ZNF234Q14588 700 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 UBXN2BQ14CS0 331 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
SPAST-201ENST00000315285 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 FLYWCH1Q4VC44 716 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 C22orf42Q6IC83 251 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SLC29A4Q7RTT9 530 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 SHKBP1Q8TBC3 707 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 HEBP1Q9NRV9 189 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 ZNF69Q9UC07 566 aa13.18□□□□□ -0.3
SPAST-201ENST00000315285 A0A1B0GUL6 1792 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 A8MV72 311 aaPredicted RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 INMT-MINDY4F8WBC2 141 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 ZNF20P17024 532 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 SLC9A3P48764 834 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 NFE2L1Q14494 772 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 TBRG1Q3YBR2 411 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 DEFB134Q4QY38 66 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 C6orf183Q5T699 404 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 THOC7Q6I9Y2 204 aaKnown RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 TMEM107Q6UX40 140 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 FAM43BQ6ZT52 329 aaPredicted RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 ANKRD13BQ86YJ7 626 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 OR7G3Q8NG95 312 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 TGM5O43548 720 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 UGDHO60701 494 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 ZNF432O94892 652 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 CSN2P05814 226 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 HTR1AP08908 422 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 HNRNPA1P09651 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPAST-201ENST00000315285 ALDOCP09972 364 aaKnown RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 OR3A3P47888 321 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 OR3A2P47893 321 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 APLP1P51693 650 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 ZNF267Q14586 743 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms