RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TMEM181Q9P2C4 612 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 PLEKHM1Q9Y4G2 1056 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 ZNF888P0CJ79 500 aaPredicted RBP13.02□□□□□ -0.32
DDX54-202ENST00000314045 SRFP11831 508 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 NDUFV2P19404 249 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 GSTM3P21266 225 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 FLYWCH1Q4VC44 716 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 METRNLQ641Q3 311 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 DEFB123Q8N688 67 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 OR56A3Q8NH54 315 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 ZNF671Q8TAW3 534 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 MR1Q95460 341 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 GAL3ST3Q96A11 431 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 FCRL4Q96PJ5 515 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 TOR3AQ9H497 397 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 C19orf25Q9UFG5 118 aaPredicted RBP13.02□□□□□ -0.32
DDX54-202ENST00000314045 BTNL2Q9UIR0 455 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 CXorf51AA0A1B0GTR3 108 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 LOC100130705A0A1B0GUX0 176 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 ZNF821O75541 412 aaPredicted RBP13.02□□□□□ -0.32
DDX54-202ENST00000314045 HMGN1P05114 100 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 HEXBP07686 556 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 SYPP08247 313 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 PRSS36Q5K4E3 855 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 C1orf189Q5VU69 101 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 SYCE2Q6PIF2 218 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 VTCN1Q7Z7D3 282 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 RETREG3Q86VR2 466 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 TMEM156Q8N614 296 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 IL17RCQ8NAC3 791 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 OSBPL10Q9BXB5 764 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 MYNNQ9NPC7 610 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 RARRES3Q9UL19 164 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.32
DDX54-202ENST00000314045 C2CD4DB7Z1M9 353 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 H0Y8X5 98 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 HCN1O60741 890 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 FBLP22087 321 aaKnown RBP13.02□□□□□ -0.33
DDX54-202ENST00000314045 HIST1H1TP22492 207 aaPredicted RBP13.02□□□□□ -0.33
DDX54-202ENST00000314045 IQCCQ4KMZ1 466 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 OR5M3Q8NGP4 307 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 OR2T11Q8NH01 316 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 FRS2Q8WU20 508 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 GTF2H4Q92759 462 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 PDXPQ96GD0 296 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 TMEM19Q96HH6 336 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 DEPDC7Q96QD5 511 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 HMG20AQ9NP66 347 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 IKZF2Q9UKS7 526 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 PPIEQ9UNP9 301 aaKnown RBP13.02□□□□□ -0.33
DDX54-202ENST00000314045 C5orf67F2Z3F1 127 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 NPPBP16860 134 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 NR4A1P22736 598 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 CXCR1P25024 350 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 PFN3P60673 137 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 FCHO2Q0JRZ9 810 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 RGNQ15493 299 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 TMEM215Q68D42 235 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 ENPP6Q6UWR7 440 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 MCATQ8IVS2 390 aaKnown RBP13.02□□□□□ -0.33
DDX54-202ENST00000314045 OR10H5Q8NGA6 315 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
DDX54-202ENST00000314045 SERINC2Q96SA4 455 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 C6orf106Q9H6K1 298 aaPredicted RBP13.02□□□□□ -0.33
DDX54-202ENST00000314045 TBC1D17Q9HA65 648 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 PLAC1Q9HBJ0 212 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 SLAMF8Q9P0V8 285 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 EPHA6Q9UF33 1036 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 IFT52Q9Y366 437 aa13.02□□□□□ -0.33
DDX54-202ENST00000314045 SEC16AO15027 2179 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 CLCN2P51788 898 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 METAP1P53582 386 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 CDH15P55291 814 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 CSTF1Q05048 431 aaKnown RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 MAPK11Q15759 364 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 C19orf43Q9BQ61 176 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 PELOQ9BRX2 385 aaKnown RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 TPK1Q9H3S4 243 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 CLMPQ9H6B4 373 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 FTSJ1Q9UET6 329 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 MAU2Q9Y6X3 613 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 PLXNA1Q9UIW2 1896 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 A0A0A6YYC8 382 aaPredicted RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 ANHXE9PGG2 379 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 I3L1I5 382 aaPredicted RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 GFYI3L273 518 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 SOX14O95416 240 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 KCNAB2Q13303 367 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 TRAM2Q15035 370 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 RUNDC3AQ59EK9 446 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 DAZLQ92904 295 aaKnown RBP13.01□□□□□ -0.33
DDX54-202ENST00000314045 FBXL20Q96IG2 436 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 TUBB1Q9H4B7 451 aa13.01□□□□□ -0.33
DDX54-202ENST00000314045 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms