RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ZNF267Q14586 743 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-202ENST00000310645 GPR33Q49SQ1 333 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 CCSMST1Q4G0I0 132 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 CLLU1OSQ5K130 101 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 DCST1Q5T197 706 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 HECTD3Q5T447 861 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 LYPLAL1Q5VWZ2 237 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 ANKRD54Q6NXT1 300 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 CEACAM20Q6UY09 585 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 HSDL2Q6YN16 418 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 HMGN2P46Q86SG4 172 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 OR52N2Q8NGI0 321 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 CHTF18Q8WVB6 975 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 TM9SF4Q92544 642 aa13.99□□□□□ -0.17
COL6A2-202ENST00000310645 CKAP5Q14008 2032 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 A8MUA0 341 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 PRKYO43930 277 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 SDHBP21912 280 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 PUM1Q14671 1186 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 SNAPC1Q16533 368 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 TPGS1Q6ZTW0 290 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 APCDD1Q8J025 514 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 CLDN22Q8N7P3 220 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 WDR20Q8TBZ3 569 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 LRR1Q96L50 414 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 C1GALT1Q9NS00 363 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 EVA1BQ9NVM1 165 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 GLTPQ9NZD2 209 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 C5orf58C9J3I9 102 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 TGFB1P01137 390 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 CBSLP0DN79 551 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 ZNF250P15622 560 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 CBSP35520 551 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 INSL4Q14641 139 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 POU4F3Q15319 338 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 MEDAGQ5VYS4 303 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 PRSS55Q6UWB4 352 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 USP45Q70EL2 814 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 FAM181AQ8N9Y4 354 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 OR52I1Q8NGK6 324 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 DACT3Q96B18 629 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 TMED9Q9BVK6 235 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 BRD9Q9H8M2 597 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 SPATA6Q9NWH7 488 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 EXO1Q9UQ84 846 aaKnown RBP13.98□□□□□ -0.17
COL6A2-202ENST00000310645 ANGPT4Q9Y264 503 aa13.98□□□□□ -0.17
COL6A2-202ENST00000310645 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 SLC30A4O14863 429 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 CSNK1DP48730 415 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 FAM110CQ1W6H9 321 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ZNF730Q6ZMV8 503 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 OR6C4Q8NGE1 309 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 OR8J1Q8NGP2 316 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 AP3S1Q92572 193 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 RAB8BQ92930 207 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 PPCDCQ96CD2 204 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 MSANTD3Q96H12 275 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ZSCAN5AQ9BUG6 496 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 WRAP53Q9BUR4 548 aaKnown RBP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 GTPBP2Q9BX10 602 aaKnown RBP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 OR51B5Q9H339 312 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 REV1Q9UBZ9 1251 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 NR2F6P10588 404 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ZNF8P17098 575 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 LIMS1P48059 325 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 STK19P49842 368 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 MGAT3Q09327 533 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 IDO2Q6ZQW0 420 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 MMP21Q8N119 569 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ANKK1Q8NFD2 765 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 OR7G3Q8NG95 312 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ZNF431Q8TF32 576 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 AKAP1Q92667 903 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 HCN2Q9UL51 889 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 GSTK1Q9Y2Q3 226 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 GPR52Q9Y2T5 361 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 TRAV6A0A075B6T7 132 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 VNN2O95498 520 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 PDGFAP04085 211 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 BCHEP06276 602 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 HMGA2P52926 109 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 RAB8AP61006 207 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 SNRPGP62308 76 aaKnown RBP13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ABATP80404 500 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 FCN2Q15485 313 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 TAF12Q16514 161 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 ZNF628Q5EBL2 1059 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 LIPJQ5W064 366 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 TIGD3Q6B0B8 471 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 CRTC1Q6UUV9 634 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 TMPRSS11BQ86T26 416 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 LHFPL3Q86UP9 236 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 LSMEM1Q8N8F7 131 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 OR4M2Q8NGB6 313 aa13.97□□□□□ -0.17
COL6A2-202ENST00000310645 RNASET2O00584 256 aaKnown RBP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 TIA1P31483 386 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL6A2-202ENST00000310645 PTGS2P35354 604 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms