RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TRIM62Q9BVG3 475 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 TRPS1Q9UHF7 1281 aa17.21■□□□□ 0.35
SPSB4-201ENST00000310546 PRAMEF25A6NGN4 478 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 TOXO94900 526 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PROS1P07225 676 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PIPP12273 146 aaPredicted RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PCSK1P29120 753 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 CRATP43155 626 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 RPS25P62851 125 aaKnown RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 SERINC3Q13530 473 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 SF1Q15637 639 aaKnown RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 LGALSLQ3ZCW2 172 aaPredicted RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 MPPE1Q53F39 396 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 LAS2Q8IYD9 372 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 TM9SF4Q92544 642 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 UCN3Q969E3 161 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 ZSWIM3Q96MP5 696 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 TRIB3Q96RU7 358 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 NTMT1Q9BV86 223 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 RBCK1Q9BYM8 510 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 SLC25A19Q9HC21 320 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 NUDT15Q9NV35 164 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 NINQ8N4C6 2090 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 A0A1W2PPL8 197 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 H3BN98 237 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 HMBSP08397 361 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 ANXA3P12429 323 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 CTPS1P17812 591 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 GPR15P49685 360 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 ZNF91Q05481 1191 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 RBBP4Q09028 425 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 GRM7Q14831 915 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 GPR68Q15743 365 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 IFI44LQ53G44 452 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 FBXL22Q6P050 247 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 TAGAPQ8N103 731 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PROKR2Q8NFJ6 384 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 KCNJ15Q99712 375 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 SLC29A3Q9BZD2 475 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 FTSJ1Q9UET6 329 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 AFF4Q9UHB7 1163 aaKnown RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 EXO1Q9UQ84 846 aaKnown RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PCDHGC4Q9Y5F7 938 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 GADD45GO95257 159 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 LAMP1P11279 417 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 SDHBP21912 280 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PTGER3P43115 390 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 NOXRED1Q6NXP6 359 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 RTL4Q6ZR62 310 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 MRPL10Q7Z7H8 261 aaKnown RBP17.2■□□□□ 0.34
SPSB4-201ENST00000310546 LAPTM4BQ86VI4 370 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 TMEM86AQ8N2M4 240 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 CHCHD4Q8N4Q1 142 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 C11orf65Q8NCR3 313 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 TSSK6Q9BXA6 273 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 ACER3Q9NUN7 267 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 PCDHB11Q9Y5F2 797 aa17.2■□□□□ 0.34
SPSB4-201ENST00000310546 NDUFA2O43678 99 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 KCNJ13O60928 360 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 STK16O75716 305 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 ACSM4P0C7M7 580 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 RGRP47804 291 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 PTPN5P54829 565 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 WNT3P56703 355 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 HSF2Q03933 536 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 CSTF1Q05048 431 aaKnown RBP17.19■□□□□ 0.34
SPSB4-201ENST00000310546 ABRQ12979 859 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 SRFBP1Q8NEF9 429 aaKnown RBP17.19■□□□□ 0.34
SPSB4-201ENST00000310546 OR52H1Q8NGJ2 320 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 SGTBQ96EQ0 304 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 SAMD11Q96NU1 681 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 SERPINB11Q96P15 392 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 GSX2Q9BZM3 304 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPSB4-201ENST00000310546 CUEDC1Q9NWM3 386 aaPredicted RBP17.19■□□□□ 0.34
SPSB4-201ENST00000310546 MRPL39Q9NYK5 338 aaKnown RBP17.19■□□□□ 0.34
SPSB4-201ENST00000310546 OARD1Q9Y530 152 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 LOC105369274A0A096LPK9 316 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 HNRNPCL2B2RXH8 293 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 CBX4O00257 560 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 PAHP00439 452 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 PRPS1L1P21108 318 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 EVX1P49640 407 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 GPR176Q14439 515 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 NCF4Q15080 339 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 OR2G6Q5TZ20 316 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 TMEM107Q6UX40 140 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 MIB1Q86YT6 1006 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 FAM9CQ8IZT9 166 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 OR4N4Q8N0Y3 316 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 MS4A15Q8N5U1 240 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 TTC9BQ8N6N2 239 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 TCEANCQ8N8B7 351 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 ZFP41Q8N8Y5 198 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 OR6M1Q8NGM8 313 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 IFT46Q9NQC8 304 aa17.19■□□□□ 0.34
SPSB4-201ENST00000310546 PPIEQ9UNP9 301 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms