RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 TRIM71Q2Q1W2 868 aaKnown RBP12.87□□□□□ -0.35
SEC23A-201ENST00000307712 RTP2Q5QGT7 225 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 MEDAGQ5VYS4 303 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF767PQ75MW2 155 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEC23A-201ENST00000307712 MYEOVQ96EZ4 313 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 TRMT61BQ9BVS5 477 aaKnown RBP12.87□□□□□ -0.35
SEC23A-201ENST00000307712 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
SEC23A-201ENST00000307712 P2RX2Q9UBL9 471 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 FBXW2Q9UKT8 454 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 PCDHGB1Q9Y5G3 927 aa12.87□□□□□ -0.35
SEC23A-201ENST00000307712 MEN1O00255 615 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 FAAHO00519 579 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 HSF2Q03933 536 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF91Q05481 1191 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 LRIF1Q5T3J3 769 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 HSDL2Q6YN16 418 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 RDH14Q9HBH5 336 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 NFKBIL1Q9UBC1 381 aaPredicted RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 YIPF1Q9Y548 306 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 CFAP20Q9Y6A4 193 aaKnown RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ICMTO60725 284 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 PRSS23O95084 383 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 GASTP01350 101 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 BMP1P13497 986 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 HOXD10P28358 340 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ZNF791Q3KP31 576 aaPredicted RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 CCDC58Q4VC31 144 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 OR2G6Q5TZ20 316 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 CRTC1Q6UUV9 634 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 OR4K5Q8NGD3 323 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 RFT1Q96AA3 541 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 C12orf66Q96MD2 445 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ERMAPQ96PL5 475 aaPredicted RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SECISBP2Q96T21 854 aaKnown RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 GON7Q9BXV9 100 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 KCNK12Q9HB15 430 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 IGLV3-10A0A075B6K4 115 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 GLOD5A6NK44 160 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SSX4O60224 188 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 OR12D1P0DN82 309 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 AOAHP28039 575 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SLC14A1Q13336 389 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 NXNL2Q5VZ03 156 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ADNP2Q6IQ32 1131 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SLC27A4Q6P1M0 643 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SLC36A4Q6YBV0 504 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ELAC1Q9H777 363 aaKnown RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SIRT5Q9NXA8 310 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 MGAT4AQ9UM21 535 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 BAIAP2Q9UQB8 552 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SOCS5O75159 536 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 GPX5O75715 221 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 GSTM3P21266 225 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 NCBP2P52298 156 aaKnown RBP eCLIP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 CBX2Q14781 532 aaPredicted RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SLC5A12Q1EHB4 618 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 GDPD4Q6W3E5 623 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 FAM20CQ8IXL6 584 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 PCNPQ8WW12 178 aaKnown RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 RPS6KB2Q9UBS0 482 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 SRRDQ9UH36 339 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 BTNL2Q9UIR0 455 aa12.86□□□□□ -0.35
SEC23A-201ENST00000307712 PPIEQ9UNP9 301 aaKnown RBP12.86□□□□□ -0.35
SEC23A-201ENST00000307712 ANHXE9PGG2 379 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 M0R082 166 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 HOXC11O43248 304 aaPredicted RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 ALX3O95076 343 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 ETV3P41162 512 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 TGM4P49221 684 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 LINGO2Q7L985 606 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 LMNTD1Q8N9Z9 388 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
SEC23A-201ENST00000307712 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 CCDC120Q96HB5 630 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 IL20RAQ9UHF4 553 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 PLAGL1Q9UM63 463 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 TTC3P53804 2025 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 A0A1W2PRG6 482 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 HPGDSO60760 199 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 ANXA3P12429 323 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 HSD3B1P14060 373 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 UQCRC2P22695 453 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 DNASE1P24855 282 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 HSD3B2P26439 372 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 TGM3Q08188 693 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 NDUFA9Q16795 377 aa12.85□□□□□ -0.35
SEC23A-201ENST00000307712 FNDC3BQ53EP0 1204 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms