RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CCDC89Q8N998 374 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF721Q8TF20 911 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 EEF1AKMT1Q8WVE0 214 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 TMEM171Q8WVE6 324 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 SLC44A1Q8WWI5 657 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 GAL3ST3Q96A11 431 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 CALR3Q96L12 384 aaKnown RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 TSNARE1Q96NA8 513 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 ZFP3Q96NJ6 502 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 AIF1LQ9BQI0 150 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 PIGQQ9BRB3 760 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 UGT2B28Q9BY64 529 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 RBSNQ9H1K0 784 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 PIGMQ9H3S5 423 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF701Q9NV72 531 aaPredicted RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 ARL15Q9NXU5 204 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 AMFRQ9UKV5 643 aa10.81□□□□□ -0.68
SMIM4-201ENST00000307106 CNOT11Q9UKZ1 510 aaKnown RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 CHCHD2Q9Y6H1 151 aaPredicted RBP10.81□□□□□ -0.68
SMIM4-201ENST00000307106 CYR61O00622 381 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 SNPHO15079 494 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 ERI3O43414 337 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 CD5LO43866 347 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 TRIM3O75382 744 aaPredicted RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 RCBTB2O95199 551 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 ETHE1O95571 254 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 HPNP05981 417 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 ZSCAN5DPP0CG00 497 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 CYP4B1P13584 511 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 HNRNPH1P31943 449 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 SOX18P35713 384 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 RGS4P49798 205 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 CDK9P50750 372 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 DIO3P55073 304 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 BASP1P80723 227 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 FAM27E3Q08E93 113 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 VEZF1Q14119 521 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 TOMM20Q15388 145 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 SPA17Q15506 151 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 CAVIN1Q6NZI2 390 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 TMPRSS11BQ86T26 416 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 CNGA4Q8IV77 575 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 C9orf40Q8IXQ3 194 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 DND1Q8IYX4 353 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 SLC15A4Q8N697 577 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 UBL4BQ8N7F7 174 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 GPATCH11Q8N954 259 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 ZPLD1Q8TCW7 415 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 IGFBPL1Q8WX77 278 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 INTS12Q96CB8 462 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 MS4A6EQ96DS6 147 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 TM9SF2Q99805 663 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 MED18Q9BUE0 208 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 CXorf56Q9H5V9 222 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 PELI2Q9HAT8 420 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 TRMT6Q9UJA5 497 aaKnown RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 PACSIN3Q9UKS6 424 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 PACSIN2Q9UNF0 486 aaPredicted RBP10.8□□□□□ -0.68
SMIM4-201ENST00000307106 WIF1Q9Y5W5 379 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 COMMD10Q9Y6G5 202 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 DYSFO75923 2080 aa10.8□□□□□ -0.68
SMIM4-201ENST00000307106 PRR14LQ5THK1 2151 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 A0A088AWK7 358 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 PABPN1LA6NDY0 278 aaKnown RBP10.79□□□□□ -0.68
SMIM4-201ENST00000307106 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 LDB3O75112 727 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 FAM157CP0CG43 387 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 ZNF10P21506 573 aaPredicted RBP10.79□□□□□ -0.68
SMIM4-201ENST00000307106 SERPINB3P29508 390 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
SMIM4-201ENST00000307106 LIM2P55344 173 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 SERTAD2Q14140 314 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 EFTUD2Q15029 972 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMIM4-201ENST00000307106 CLEC12BQ2HXU8 276 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 EIPR1Q53HC9 387 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 TBCELQ5QJ74 424 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 VSTM4Q8IW00 320 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 KLHDC8AQ8IYD2 350 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 GCNT2Q8N0V5 402 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 MYO1HQ8N1T3 1032 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 DIO2Q92813 273 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 ABTB1Q969K4 478 aaPredicted RBP10.79□□□□□ -0.68
SMIM4-201ENST00000307106 UBQLN3Q9H347 655 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 ACBD3Q9H3P7 528 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 DAPP1Q9UN19 280 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 DYRK1BQ9Y463 629 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 IKBKGQ9Y6K9 419 aa10.79□□□□□ -0.68
SMIM4-201ENST00000307106 GRID2IPA4D2P6 1211 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 LRIT2A6NDA9 550 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 CBFA2T2O43439 604 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 FBXO45P0C2W1 286 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 CERS1P27544 350 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 LOXP28300 417 aaPredicted RBP10.78□□□□□ -0.68
SMIM4-201ENST00000307106 SLC1A2P43004 574 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 MSH2P43246 934 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 MASP1P48740 699 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 AP1S2P56377 157 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 ID2Q02363 134 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 SNX1Q13596 522 aa10.78□□□□□ -0.68
SMIM4-201ENST00000307106 THOC5Q13769 683 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms