RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C1orf109Q9NX04 203 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ABI3Q9P2A4 366 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TEKT2Q9UIF3 430 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZDHHC2Q9UIJ5 367 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RAP2CQ9Y3L5 183 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 POLR3HQ9Y535 204 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DNAJC15Q9Y5T4 150 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PTGDR2Q9Y5Y4 395 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CLCA3PQ9Y6N3 262 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 A0A1W2PR48 441 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 GLOD5A6NK44 160 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ITM2AO43736 263 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DPM1O60762 260 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SASH3O75995 380 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ANXA4P09525 319 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ITGAMP11215 1152 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ALOX15P16050 662 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NR1D1P20393 614 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PRPH2P23942 346 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MAPK1P28482 360 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 STT3AP46977 705 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 WDR4P57081 412 aaKnown RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PPP2R2AP63151 447 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RPL38P63173 70 aaKnown RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 Q0VFX4 171 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 BST1Q10588 318 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NFATC3Q12968 1075 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PDCD2Q16342 344 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ATP6AP1LQ52LC2 224 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 HSP90B2PQ58FF3 399 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CRB2Q5IJ48 1285 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 OR4N5Q8IXE1 308 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SLC5A8Q8N695 610 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SIRT6Q8N6T7 355 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZNF781Q8N8C0 355 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 B3GNT7Q8NFL0 401 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 FAM76AQ8TAV0 307 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ANKRD9Q96BM1 317 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 KLHL29Q96CT2 875 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C19orf60Q96EN9 201 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 VMP1Q96GC9 406 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ART5Q96L15 291 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 IMMP1LQ96LU5 166 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PPP3R2Q96LZ3 170 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SMAD5Q99717 465 aaKnown RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 WDR77Q9BQA1 342 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MMP25Q9NPA2 562 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 GIMAP4Q9NUV9 329 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 THAP1Q9NVV9 213 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C5AR2Q9P296 337 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PTGFRNQ9P2B2 879 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 COPS7AQ9UBW8 275 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 VTI1BQ9UEU0 232 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RALYQ9UKM9 306 aaKnown RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PSME2Q9UL46 239 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ENTPD4Q9Y227 616 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TMED5Q9Y3A6 229 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 HEMK1Q9Y5R4 338 aaPredicted RBP10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MYOCOSA0A1B0GUC4 107 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C17orf105B2RV13 164 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TGFBR3LH3BV60 316 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 LSM1O15116 133 aaKnown RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ERAL1O75616 437 aaKnown RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 GPR75O95800 540 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CELA2AP08217 269 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 IL3P08700 152 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DRD2P14416 443 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ARRB2P32121 409 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RPL14P50914 215 aaKnown RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CLCN2P51788 898 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RAE1P78406 368 aaKnown RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SOWAHCQ53LP3 525 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ABHD17BQ5VST6 288 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NOXRED1Q6NXP6 359 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SLC48A1Q6P1K1 146 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 GALNT18Q6P9A2 607 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ISLR2Q6UXK2 745 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TEX19Q8NA77 164 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 OR4K14Q8NGD5 310 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DNAJB14Q8TBM8 379 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 LRRC8CQ8TDW0 803 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C16orf78Q8WTQ4 265 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NCLNQ969V3 563 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TM4SF18Q96CE8 201 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TUBGCP3Q96CW5 907 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZNF354BQ96LW1 612 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SEMA4CQ9C0C4 833 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TUBB1Q9H4B7 451 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZNF552Q9H707 407 aaPredicted RBP10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MANSC1Q9H8J5 431 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MIEF1Q9NQG6 463 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SIRT5Q9NXA8 310 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DLGAP4Q9Y2H0 992 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms