RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 H0YJX3 145 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 DNAJB5O75953 348 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 AK1P00568 194 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 CSN2P05814 226 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 HOXD8P13378 290 aaPredicted RBP15.26■□□□□ 0.03
USP42-201ENST00000306177 DUSP3P51452 185 aaPredicted RBP15.26■□□□□ 0.03
USP42-201ENST00000306177 HTRA3P83110 453 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 C18orf21Q32NC0 220 aaPredicted RBP15.26■□□□□ 0.03
USP42-201ENST00000306177 PRAMEF17Q5VTA0 474 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 CES4AQ5XG92 561 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 SLC39A11Q8N1S5 342 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 TUBA1CQ9BQE3 449 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 SLC17A9Q9BYT1 436 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 IL17CQ9P0M4 197 aa15.26■□□□□ 0.03
USP42-201ENST00000306177 UNC119BA6NIH7 251 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 SOCS7O14512 581 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 EIF1AYO14602 144 aaKnown RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 TMBIM6P55061 237 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 MLLT10P55197 1068 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ZNF423Q2M1K9 1284 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 UGT3A2Q3SY77 523 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ANKDD1AQ495B1 522 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 GALNT12Q8IXK2 581 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ACTL7AQ9Y615 435 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 A0A1B0GVI7 797 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 J3QRK9 145 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 HCRTR2O43614 444 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 DUX1O43812 170 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 GGT1P19440 569 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ZNF33BQ06732 778 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 RPA4Q13156 261 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 LCN8Q6JVE9 175 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 SPATC1Q76KD6 591 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 PLCZ1Q86YW0 608 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 MARVELD2Q8N4S9 558 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 PRR11Q96HE9 360 aaPredicted RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 CASD1Q96PB1 797 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 LIN28AQ9H9Z2 209 aaKnown RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 MGAT4AQ9UM21 535 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 DRGXA6NNA5 263 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 RTCAO00442 366 aaKnown RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 MAGEA6P43360 314 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 CLCA4Q14CN2 919 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ZNF829Q3KNS6 432 aaPredicted RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 UAP1L1Q3KQV9 507 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 SLC36A3Q495N2 470 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 GRHL2Q6ISB3 625 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 STX12Q86Y82 276 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 CD200R1Q8TD46 325 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ISOC1Q96CN7 298 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 NXPE2Q96DL1 559 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 IL26Q9NPH9 171 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 OXSR1O95747 527 aaPredicted RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 CST5P28325 142 aaPredicted RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 GDI2P50395 445 aaKnown RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 SEC23BQ15437 767 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 SNX29P2Q8IUI4 249 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.25■□□□□ 0.03
USP42-201ENST00000306177 NSMAFQ92636 917 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 DAZLQ92904 295 aaKnown RBP15.25■□□□□ 0.03
USP42-201ENST00000306177 TMEM125Q96AQ2 219 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 TGM7Q96PF1 710 aa15.25■□□□□ 0.03
USP42-201ENST00000306177 ZNF878C9JN71 531 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 TP53I11O14683 189 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 PPM1BO75688 479 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 PORP16435 677 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 CBLP22681 906 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 RBM34P42696 430 aaKnown RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 HTR6P50406 440 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 EIF5AP63241 154 aaKnown RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 PMS2P3Q13401 168 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 ODF4Q2M2E3 257 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 MFSD2AQ8NA29 543 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 KDM1BQ8NB78 822 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 OR56A3Q8NH54 315 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 TSACCQ96A04 125 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 S100A16Q96FQ6 103 aaKnown RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 FZD3Q9NPG1 666 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 TMEM184CQ9NVA4 438 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 STOX2Q9P2F5 926 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 FLRT2O43155 660 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 CHP2O43745 196 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 FBLP22087 321 aaKnown RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 PON2Q15165 354 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 ZNF789Q5FWF6 425 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 PAQR7Q86WK9 346 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.24■□□□□ 0.03
USP42-201ENST00000306177 OR8J1Q8NGP2 316 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 MNTQ99583 582 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 SOX17Q9H6I2 414 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 ZDHHC7Q9NXF8 308 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 ZNF224Q9NZL3 707 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 SARDHQ9UL12 918 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 OR1A2Q9Y585 309 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 SEMA3DO95025 777 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 HCKP08631 526 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 DHRS4L1P0CG22 281 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 GPR143P51810 404 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms