RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ARAFP10398 606 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 CDH2P19022 906 aaPredicted RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 ITGA1P56199 1179 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 GAS6Q14393 721 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 SMN1Q16637 294 aaKnown RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 LAIR1Q6GTX8 287 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 FBXO42Q6P3S6 717 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 RBM45Q8IUH3 476 aaKnown RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 CLVS1Q8IUQ0 354 aaPredicted RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 OR4N4Q8N0Y3 316 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 PIK3C3Q8NEB9 887 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 CNRIP1Q96F85 164 aaPredicted RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 AMDHD1Q96NU7 426 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 KCNC2Q96PR1 638 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 NAA50Q9GZZ1 169 aaKnown RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 SLC35C2Q9NQQ7 365 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 OR6C2Q9NZP2 312 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ASB4Q9Y574 426 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 AP1M2Q9Y6Q5 423 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 A6NCN8 305 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 C5orf58C9J3I9 102 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 TNFRSF11BO00300 401 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 HMGN4O00479 90 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 TYRP1P17643 537 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 SLC5A2P31639 672 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 LSSP48449 732 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ID2Q02363 134 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 FADDQ13158 208 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 LTB4RQ15722 352 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 DEFB134Q4QY38 66 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 IFI44LQ53G44 452 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 SAXO2Q658L1 398 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 KDM4DQ6B0I6 523 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 FRMPD2BQ6IN97 320 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ZNF425Q6IV72 752 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 GPR153Q6NV75 609 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 TMEM107Q6UX40 140 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 LPCAT2Q7L5N7 544 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 OR9Q2Q8NGE9 314 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 VANGL1Q8TAA9 524 aaPredicted RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 COL26A1Q96A83 441 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 NEURL3Q96EH8 262 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ZBED6CLQ96FA7 236 aaPredicted RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 C16orf58Q96GQ5 468 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 OR2A14Q96R47 310 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 TMEM38AQ9H6F2 299 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 KRT84Q9NSB2 600 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ZCCHC3Q9NUD5 404 aaKnown RBP10.78□□□□□ -0.68
SCG2-201ENST00000305409 HEBP2Q9Y5Z4 205 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 ABCA7Q8IZY2 2146 aa10.78□□□□□ -0.68
SCG2-201ENST00000305409 MAN2B1O00754 1011 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 PCDH17O14917 1159 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 KCNJ13O60928 360 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 BMP10O95393 424 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 VIPP01282 170 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 UGT2B7P16662 529 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 RAD23AP54725 363 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 ISL1P61371 349 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 ILF3Q12906 894 aaKnown RBP eCLIP10.77□□□□□ -0.68
SCG2-201ENST00000305409 LASP1Q14847 261 aaKnown RBP10.77□□□□□ -0.68
SCG2-201ENST00000305409 MAPK11Q15759 364 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 EXOC3L2Q2M3D2 409 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 C6orf141Q5SZD1 244 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 SLC5A8Q8N695 610 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 TTC29Q8NA56 475 aaPredicted RBP10.77□□□□□ -0.68
SCG2-201ENST00000305409 SIMC1Q8NDZ2 872 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 DENND6BQ8NEG7 585 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 OR2L5Q8NG80 312 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 KAT2AQ92830 837 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 FEVQ99581 238 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 SPATA9Q9BWV2 254 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 CCDC90BQ9GZT6 254 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 QRSL1Q9H0R6 528 aaKnown RBP10.77□□□□□ -0.68
SCG2-201ENST00000305409 OR51I1Q9H343 314 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 TRPV5Q9NQA5 729 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 EVA1BQ9NVM1 165 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 DMTF1Q9Y222 760 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 MRPS2Q9Y399 296 aaKnown RBP10.77□□□□□ -0.68
SCG2-201ENST00000305409 LYVE1Q9Y5Y7 322 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 KCNE3Q9Y6H6 103 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 DMDP11532 3685 aa10.77□□□□□ -0.68
SCG2-201ENST00000305409 M0R129 80 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 SLC28A2O43868 658 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 RECKO95980 971 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 CTSBP07858 339 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 THEGLP0DJG4 465 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 CRHBPP24387 322 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 ABATP80404 500 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 EIF2B5Q13144 721 aaKnown RBP10.77□□□□□ -0.69
SCG2-201ENST00000305409 PUM1Q14671 1186 aaKnown RBP eCLIP10.77□□□□□ -0.69
SCG2-201ENST00000305409 ZNF630Q2M218 657 aaPredicted RBP10.77□□□□□ -0.69
SCG2-201ENST00000305409 GPR107Q5VW38 600 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 REEP3Q6NUK4 255 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 PRSS41Q7RTY9 318 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 GPR141Q7Z602 305 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 PAQR7Q86WK9 346 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 NLGN4XQ8N0W4 816 aa10.77□□□□□ -0.69
SCG2-201ENST00000305409 MFSD9Q8NBP5 474 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms